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Protein
Submitted name:

Nipsnap1 protein

Gene

Nipsnap1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • sensory perception of pain Source: GO_Central

Names & Taxonomyi

Protein namesi
Submitted name:
Nipsnap1 proteinImported
Gene namesi
Name:Nipsnap1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1310419 Nipsnap1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ5EBA4

PTM databases

iPTMnetiQ5EBA4
PhosphoSitePlusiQ5EBA4

Expressioni

Gene expression databases

GenevisibleiQ5EBA4 RN

Interactioni

Protein-protein interaction databases

IntActiQ5EBA4, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliQ5EBA4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini184 – 281NIPSNAPInterPro annotationAdd BLAST98

Phylogenomic databases

eggNOGiKOG2883 Eukaryota
ENOG410XSWP LUCA
HOGENOMiHOG000194298
HOVERGENiHBG052627
OMAiYALHTHN
PhylomeDBiQ5EBA4

Family and domain databases

InterProiView protein in InterPro
IPR011008 Dimeric_a/b-barrel
IPR012577 NIPSNAP
PfamiView protein in Pfam
PF07978 NIPSNAP, 1 hit
SUPFAMiSSF54909 SSF54909, 2 hits

Sequencei

Sequence statusi: Fragment.

Q5EBA4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
APRLCIISAA ARRLLRKPGP CVGDLAAARA VRFYSKDSEG SWFRSLFVHK
60 70 80 90 100
VDPRKDAHST LLSKKETSNL YKIQFHNVKP ECLDAYNSLT EAVLPKLHLD
110 120 130 140 150
EDYPCSLVGN WNTWYGEQDQ AVHLWRFSGG YPALMDCMNK LKTNKEYLEF
160 170 180 190 200
RKERSKMLLS RRNQLLLEFS FWNEPQPRAG PNIYELRTYK LKPGTMIEWG
210 220 230 240 250
NNWARAIKYR QENQEAVGGF FSQIGELYVV HHLWAYKDLQ SREETRNAAW
260 270 280
RKRGWDENVY YTVPLVRHME SRIMIPLKIS PLQ
Length:283
Mass (Da):33,215
Last modified:March 15, 2005 - v1
Checksum:iA68A57F95561A8A1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC089879 mRNA Translation: AAH89879.1
RefSeqiNP_001094200.1, NM_001100730.1
UniGeneiRn.103205

Genome annotation databases

GeneIDi360971
KEGGirno:360971
UCSCiRGD:1310419 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC089879 mRNA Translation: AAH89879.1
RefSeqiNP_001094200.1, NM_001100730.1
UniGeneiRn.103205

3D structure databases

ProteinModelPortaliQ5EBA4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ5EBA4, 1 interactor

PTM databases

iPTMnetiQ5EBA4
PhosphoSitePlusiQ5EBA4

Proteomic databases

PRIDEiQ5EBA4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi360971
KEGGirno:360971
UCSCiRGD:1310419 rat

Organism-specific databases

CTDi8508
RGDi1310419 Nipsnap1

Phylogenomic databases

eggNOGiKOG2883 Eukaryota
ENOG410XSWP LUCA
HOGENOMiHOG000194298
HOVERGENiHBG052627
OMAiYALHTHN
PhylomeDBiQ5EBA4

Gene expression databases

GenevisibleiQ5EBA4 RN

Family and domain databases

InterProiView protein in InterPro
IPR011008 Dimeric_a/b-barrel
IPR012577 NIPSNAP
PfamiView protein in Pfam
PF07978 NIPSNAP, 1 hit
SUPFAMiSSF54909 SSF54909, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ5EBA4_RAT
AccessioniPrimary (citable) accession number: Q5EBA4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: November 7, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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