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Protein
Submitted name:

RALY heterogeneous nuclear ribonucleoprotein

Gene

RALY

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RALY heterogeneous nuclear ribonucleoproteinImported
Submitted name:
RNA binding protein (Autoantigenic, hnRNP-associated with lethal yellow) short isoformImported
Gene namesi
Name:RALYImported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 13

Organism-specific databases

VGNCiVGNC:33706 RALY

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ5E952

Expressioni

Gene expression databases

BgeeiENSBTAG00000016524

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000041837

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92RRMInterPro annotationAdd BLAST72

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili178 – 198Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
GeneTreeiENSGT00390000006718
HOGENOMiHOG000231958
HOVERGENiHBG002302
KOiK12895
OMAiXLFDYRG
OrthoDBiEOG091G0O1Q
TreeFamiTF330974

Family and domain databases

CDDicd12604 RRM_RALY, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR017347 hnRNP_C
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR034502 RALY_RRM
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
PIRSFiPIRSF037992 hnRNP-C_Raly, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

Q5E952-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG
60 70 80 90 100
CSVHKGYAFV QYANERHARA AVVGENGRVL AGQTLDINMA GEPKPNRPKG
110 120 130 140 150
LKRAASAIYR LFDYRGRLSP VPVPRAVPVK RPRVTVPLVR RVKTTIPVKL
160 170 180 190 200
FARSTAITTG TAKIKLKSSE LQTIKTELTQ IKSNIDALLG RLEQIAEEQK
210 220 230 240 250
ANPDGKKKGE SSSGSGSGGG SGSSGTGGSS RPPAPPEDTA SEAGTPQGEA
260 270 280
QARDDGDEEG LLTHSEEELE HSQDTDVEDG ALQ
Length:283
Mass (Da):30,143
Last modified:March 15, 2005 - v1
Checksum:i0C5142FF4B09D6EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02036492 Genomic DNA No translation available.
BT021068 mRNA Translation: AAX09085.1
RefSeqiNP_001014847.1, NM_001014847.1
XP_005214588.1, XM_005214531.3
XP_010809677.1, XM_010811375.2
UniGeneiBt.42846

Genome annotation databases

EnsembliENSBTAT00000044331; ENSBTAP00000041837; ENSBTAG00000016524
GeneIDi504640
KEGGibta:504640

Similar proteinsi

Entry informationi

Entry nameiQ5E952_BOVIN
AccessioniPrimary (citable) accession number: Q5E952
Secondary accession number(s): F1MF58
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: July 18, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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