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Entry version 92 (29 Sep 2021)
Sequence version 2 (20 May 2008)
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Protein

Pecanex-like protein 2

Gene

Pcnx2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May play a role in tumorigenesis.

By similarity

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Pecanex-like protein 2
Alternative name(s):
Pecanex homolog protein 2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pcnx2Imported
Synonyms:Kiaa0435, Pcnxl2
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 8

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2445010, Pcnx2

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000060212

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei36 – 53HelicalSequence analysisAdd BLAST18
Transmembranei60 – 82HelicalSequence analysisAdd BLAST23
Transmembranei825 – 845HelicalSequence analysisAdd BLAST21
Transmembranei849 – 869HelicalSequence analysisAdd BLAST21
Transmembranei882 – 902HelicalSequence analysisAdd BLAST21
Transmembranei933 – 953HelicalSequence analysisAdd BLAST21
Transmembranei976 – 998HelicalSequence analysisAdd BLAST23
Transmembranei1010 – 1030HelicalSequence analysisAdd BLAST21
Transmembranei1080 – 1100HelicalSequence analysisAdd BLAST21
Transmembranei1105 – 1125HelicalSequence analysisAdd BLAST21
Transmembranei1174 – 1194HelicalSequence analysisAdd BLAST21
Transmembranei1218 – 1238HelicalSequence analysisAdd BLAST21
Transmembranei1245 – 1265HelicalSequence analysisAdd BLAST21
Transmembranei1270 – 1290HelicalSequence analysisAdd BLAST21
Transmembranei1305 – 1325HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003339661 – 2122Pecanex-like protein 2Add BLAST2122

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi288N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi556N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1393N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1534N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1802N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2039N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q5DU28

PRoteomics IDEntifications database

More...
PRIDEi
Q5DU28

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
288004 [Q5DU28-1]
288005 [Q5DU28-2]
288006 [Q5DU28-3]
288007 [Q5DU28-4]

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
Q5DU28, 6 sites

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q5DU28

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q5DU28

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q5DU28

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000060212, Expressed in brain and 142 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q5DU28, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000042294

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q5DU28, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni92 – 164DisorderedSequence analysisAdd BLAST73
Regioni180 – 250DisorderedSequence analysisAdd BLAST71
Regioni392 – 556DisorderedSequence analysisAdd BLAST165
Regioni575 – 634DisorderedSequence analysisAdd BLAST60
Regioni1858 – 1943DisorderedSequence analysisAdd BLAST86
Regioni1955 – 1991DisorderedSequence analysisAdd BLAST37
Regioni2097 – 2122DisorderedSequence analysisAdd BLAST26

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi139 – 161Polar residuesSequence analysisAdd BLAST23
Compositional biasi181 – 203Polar residuesSequence analysisAdd BLAST23
Compositional biasi392 – 406Polar residuesSequence analysisAdd BLAST15
Compositional biasi468 – 482Polar residuesSequence analysisAdd BLAST15
Compositional biasi598 – 619Basic and acidic residuesSequence analysisAdd BLAST22
Compositional biasi1887 – 1910Polar residuesSequence analysisAdd BLAST24
Compositional biasi1919 – 1943Polar residuesSequence analysisAdd BLAST25
Compositional biasi1955 – 1989Polar residuesSequence analysisAdd BLAST35
Compositional biasi2108 – 2122Polar residuesSequence analysisAdd BLAST15

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the pecanex family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3604, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157374

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000602_3_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q5DU28

Identification of Orthologs from Complete Genome Data

More...
OMAi
KEGPLQH

Database of Orthologous Groups

More...
OrthoDBi
63639at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q5DU28

TreeFam database of animal gene trees

More...
TreeFami
TF313570

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039797, Pecanex
IPR007735, Pecanex_C

The PANTHER Classification System

More...
PANTHERi
PTHR12372, PTHR12372, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05041, Pecanex_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q5DU28-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MASQVLQLLR QGVWAALTGG WYHDPEHSKF TNSCHLYLWL FLLLLPLALH
60 70 80 90 100
LAFPPNVLTA LFYCGSVTIF FAVIKLISYR LHLMFDKGEA IQHRSPRKRS
110 120 130 140 150
KRKPEGEASS QHTARHKNPS NNRQIHSTKK EEPRGSLTTP PLCCSSRGQS
160 170 180 190 200
VHSQHSSGPL ELPAQETVED LKGVVLSEDQ PEALASSTSP GMKSESLPAS
210 220 230 240 250
QGRTPEPTPR PACPLKPVTT ELFTARKGKE SGGTAQRPAR HRSESGLVNP
260 270 280 290 300
GALKKLPQLS LSQYDLLETD ISFQPWGSEH SVLLPQPNCT QGATRAQPQN
310 320 330 340 350
RSPQDSLSSS CCQCNTVLAK PTEEELTRTS GQVELPLNQE VVDSDGEVAV
360 370 380 390 400
TLIDTSQPGE PLSLHEPIKI VITMSSTQNS ISDLESSLHL RVTSSDRTSV
410 420 430 440 450
RSSAESAGSG GAGPADPEQV RIPLITLELT EDGGGRGVSC SEGNGGERTP
460 470 480 490 500
ERMEVMSPDR CSGSGPGDGS PTPGSTLATL TPRVDPESEG SKEGQANLDP
510 520 530 540 550
ASCKSSHEKR HARVLSVDSG TDVFLSRSTK EVVSDGEKPI PTSKSDLEAK
560 570 580 590 600
EGQIPNESNF LEFVSLLESI STSKVVAPDS PAEQKGASQG PEGHASPGTK
610 620 630 640 650
EEAVENEKPN GRDPKPGKPD LPSQDPANGS PVFTQPAKSA ALFQGSRQRH
660 670 680 690 700
IIYRVTSQQD SSVLQVISGP ETSVQEEMSL DAMHVFIDEH GEVRSCYLKS
710 720 730 740 750
GNQKEGSSQH PPLNPDCVSH ARGILLSSSS STATGSPDPS SGDPAVSALQ
760 770 780 790 800
QQLLLMVARR TQSETPRHVS QDLEDSSRSS AQGKFNREQF YKFIVFPGKW
810 820 830 840 850
IKVWYDRLTL LALLDRTEDV KENMVAVLLS VLVSLLGFLT LNRGFCRDLW
860 870 880 890 900
VLLFCLVMAS CQYSLLKSVQ PDPASPIHGH NQIIAYSRPI YFCMLCSLIL
910 920 930 940 950
LLDAGAKAKH PPSYVVYGLK LFTPETLQAV RDHLIVFLCC FPAISLLGLF
960 970 980 990 1000
PQINTFCTYL LEQIDMLLFG GSAVSGITSA VYSVGRSVLA AALLHAFCFS
1010 1020 1030 1040 1050
AVKEPWSTQH IPALFSAFCG LLVALSYHLS RQSSDPSVLL SFIQCKLLPK
1060 1070 1080 1090 1100
CLHQNLEESA TDPLPQRMKD SVKDVLRSDL VICSAAAVLS FAVSASTVFL
1110 1120 1130 1140 1150
SLRPFLSIVL FALAGTVGLI THHLLPQLRK HHPWMWISHP VLRSKEYQQR
1160 1170 1180 1190 1200
EARDIAHLMW FERLYVWLQC FEKYLLYPAI VLNALTLDAF SISNYRRLGT
1210 1220 1230 1240 1250
HWDIFLMITA GMKLLRTSFC NPVHQFANLG FTVIFFHFDY KDISESFLLD
1260 1270 1280 1290 1300
FFMVSIVFTK LGDLLQKLQF VLAYVAPWQM AWGSSFHVFA QLFAIPHSAM
1310 1320 1330 1340 1350
LFFQTFATSI FSTPLSPFLG SVIFITSYVR PVKFWERSYN TRRMDNSNTR
1360 1370 1380 1390 1400
LAVQMERDPG SDDNNLNSIF YEHLTRTLQE SLCGDLVLGR WGNYSSGDCF
1410 1420 1430 1440 1450
ILASDDLNAF VHLIEIGNGL VTFQLRGLEF RGTYCQQREV EAIMEGDEDD
1460 1470 1480 1490 1500
RGCCCCKPGH LPHLLSCNAA FHLRWLTWEI TRTQYILEGY SIIDNNAATM
1510 1520 1530 1540 1550
LQVYDLRRVL IRYYVKSIIY YMVTSPKLVS WVKNESLLKS LQPFAKWHHI
1560 1570 1580 1590 1600
ERDLAMFNIN IDDDYVPCLQ GITRASYCNV FLEWIQYCAG KRQELSKTLE
1610 1620 1630 1640 1650
HVDSDEDSAL VTLAFALCIL GRRALGTAAH NMAMSLDSFL YGLHALFKGD
1660 1670 1680 1690 1700
FRVTARDEWV FADMDLLHKV VVPAIRMSLK LHQDQFTCPD EYEDPAVLYE
1710 1720 1730 1740 1750
AIRSFAKKVV ICHEGDPAWR GAMLSNKEEL LTLRHVVDEG ADEYKVIMLH
1760 1770 1780 1790 1800
RGFLSFKVIK VNKECVRGLW AGQQQELIFL RNRNPERGSI QNNKQVLRNL
1810 1820 1830 1840 1850
INSSCDQPLG YPMYVSPLTT SYLGTHKQLQ SVWGGPVTLN RVRTWFQTRW
1860 1870 1880 1890 1900
LRMRKDCSVG QRSGGGNIED GEGGAVPSAG GGSAPNGESR DGSTEQPRKG
1910 1920 1930 1940 1950
GTQQWSSPRG EAQRAGRRKG RSQSVQAHSA ISQRPPTLSS SGPILESHQA
1960 1970 1980 1990 2000
FLQTSTSVHE LAQRPSGSRL SLHTSAASLH SQPPPVTTTG HLSVRERAEA
2010 2020 2030 2040 2050
LIRSSLGSST SSTLSFLFGK RSFSSALVIS GLSAAEGGNT SDTQSSSSVN
2060 2070 2080 2090 2100
IVMGPSARAA GHAARHFSEP CEPTDSPEQG QLQDGRLAEA MEENLGVLCR
2110 2120
RASQEDMGLD DTASQQSTSD EQ
Length:2,122
Mass (Da):234,128
Last modified:May 20, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i49D31B483000EA97
GO
Isoform 2 (identifier: Q5DU28-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1067: Missing.
     1452-1452: G → GC

Show »
Length:1,056
Mass (Da):118,642
Checksum:i2DA67278663BB83E
GO
Isoform 3 (identifier: Q5DU28-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1073-1121: KDVLRSDLVI...ALAGTVGLIT → VRPQHGKTAC...VQSRLISRDT
     1122-2122: Missing.

Show »
Length:1,121
Mass (Da):121,226
Checksum:i6A66D05260C98E3E
GO
Isoform 4 (identifier: Q5DU28-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1443: Missing.

Show »
Length:679
Mass (Da):75,239
Checksum:iB079D92A439D7331
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0336121 – 1443Missing in isoform 4. 1 PublicationAdd BLAST1443
Alternative sequenceiVSP_0336131 – 1067Missing in isoform 2. 1 PublicationAdd BLAST1067
Alternative sequenceiVSP_0336141073 – 1121KDVLR…VGLIT → VRPQHGKTACHRGPCLSAGM KLPGYSELAGSGKAGGGPWV QSRLISRDT in isoform 3. 2 PublicationsAdd BLAST49
Alternative sequenceiVSP_0336151122 – 2122Missing in isoform 3. 2 PublicationsAdd BLAST1001
Alternative sequenceiVSP_0336161452G → GC in isoform 2. 1 Publication1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK030215 mRNA Translation: BAC26849.1
AK043903 mRNA Translation: BAC31698.1
AK087907 mRNA Translation: BAC40038.1
AC105066 Genomic DNA No translation available.
AC151909 Genomic DNA No translation available.
BC132334 mRNA Translation: AAI32335.2
AK220342 mRNA Translation: BAD90408.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS52708.1 [Q5DU28-1]

NCBI Reference Sequences

More...
RefSeqi
NP_780770.2, NM_175561.4 [Q5DU28-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000047239; ENSMUSP00000042294; ENSMUSG00000060212 [Q5DU28-1]
ENSMUST00000131127; ENSMUSP00000119965; ENSMUSG00000060212 [Q5DU28-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
270109

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:270109

UCSC genome browser

More...
UCSCi
uc009nyl.1, mouse [Q5DU28-4]
uc009nym.1, mouse [Q5DU28-2]
uc009nyn.2, mouse [Q5DU28-1]
uc009nyo.1, mouse [Q5DU28-3]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK030215 mRNA Translation: BAC26849.1
AK043903 mRNA Translation: BAC31698.1
AK087907 mRNA Translation: BAC40038.1
AC105066 Genomic DNA No translation available.
AC151909 Genomic DNA No translation available.
BC132334 mRNA Translation: AAI32335.2
AK220342 mRNA Translation: BAD90408.1
CCDSiCCDS52708.1 [Q5DU28-1]
RefSeqiNP_780770.2, NM_175561.4 [Q5DU28-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000042294

PTM databases

GlyGeniQ5DU28, 6 sites
iPTMnetiQ5DU28
PhosphoSitePlusiQ5DU28
SwissPalmiQ5DU28

Proteomic databases

PaxDbiQ5DU28
PRIDEiQ5DU28
ProteomicsDBi288004 [Q5DU28-1]
288005 [Q5DU28-2]
288006 [Q5DU28-3]
288007 [Q5DU28-4]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
11747, 51 antibodies

The DNASU plasmid repository

More...
DNASUi
270109

Genome annotation databases

EnsembliENSMUST00000047239; ENSMUSP00000042294; ENSMUSG00000060212 [Q5DU28-1]
ENSMUST00000131127; ENSMUSP00000119965; ENSMUSG00000060212 [Q5DU28-3]
GeneIDi270109
KEGGimmu:270109
UCSCiuc009nyl.1, mouse [Q5DU28-4]
uc009nym.1, mouse [Q5DU28-2]
uc009nyn.2, mouse [Q5DU28-1]
uc009nyo.1, mouse [Q5DU28-3]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
80003
MGIiMGI:2445010, Pcnx2
VEuPathDBiHostDB:ENSMUSG00000060212

Rodent Unidentified Gene-Encoded large proteins database

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Rougei
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Phylogenomic databases

eggNOGiKOG3604, Eukaryota
GeneTreeiENSGT00940000157374
HOGENOMiCLU_000602_3_0_1
InParanoidiQ5DU28
OMAiKEGPLQH
OrthoDBi63639at2759
PhylomeDBiQ5DU28
TreeFamiTF313570

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
270109, 3 hits in 61 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Pcnx2, mouse

Protein Ontology

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PROi
PR:Q5DU28
RNActiQ5DU28, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000060212, Expressed in brain and 142 other tissues
GenevisibleiQ5DU28, MM

Family and domain databases

InterProiView protein in InterPro
IPR039797, Pecanex
IPR007735, Pecanex_C
PANTHERiPTHR12372, PTHR12372, 1 hit
PfamiView protein in Pfam
PF05041, Pecanex_C, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPCX2_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5DU28
Secondary accession number(s): A2RT20
, Q8BRN0, Q8C2V1, Q8CDD2
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 29, 2021
This is version 92 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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