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Entry version 105 (12 Aug 2020)
Sequence version 1 (26 Apr 2005)
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Protein

Chromatin-remodeling ATPase INO80

Gene

ino80

Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.PROSITE-ProRule annotation

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi823 – 830ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActivator, DNA-binding, Hydrolase
Biological processDNA damage, DNA repair, Transcription, Transcription regulation
LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Chromatin-remodeling ATPase INO80By similarity (EC:3.6.4.-By similarity)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ino80
ORF Names:AN2285
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri227321 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillusAspergillus subgen. Nidulantes
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000560 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome VII
  • UP000005890 Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000743241 – 1612Chromatin-remodeling ATPase INO80Add BLAST1612

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
Q5BAZ5

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the INO80 chromatin-remodeling complex.

PROSITE-ProRule annotation

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
162425.CADANIAP00008977

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini570 – 695DBINOPROSITE-ProRule annotationAdd BLAST126
Domaini810 – 982Helicase ATP-bindingPROSITE-ProRule annotationAdd BLAST173
Domaini1325 – 1485Helicase C-terminalPROSITE-ProRule annotationAdd BLAST161

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili379 – 455Sequence analysisAdd BLAST77
Coiled coili612 – 684Sequence analysisAdd BLAST73

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi933 – 936DEAQ box4

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi5 – 245Pro-richAdd BLAST241

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The DBINO region is involved in binding to DNA.By similarity

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the SNF2/RAD54 helicase family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0388, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000315_26_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q5BAZ5

KEGG Orthology (KO)

More...
KOi
K11665

Identification of Orthologs from Complete Genome Data

More...
OMAi
DDMYHEG

Database of Orthologous Groups

More...
OrthoDBi
188211at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.50.10810, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR020838, DBINO
IPR014001, Helicase_ATP-bd
IPR001650, Helicase_C
IPR031047, Ino80
IPR027417, P-loop_NTPase
IPR038718, SNF2-like_sf
IPR000330, SNF2_N

The PANTHER Classification System

More...
PANTHERi
PTHR45685:SF2, PTHR45685:SF2, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13892, DBINO, 1 hit
PF00271, Helicase_C, 1 hit
PF00176, SNF2_N, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00487, DEXDc, 1 hit
SM00490, HELICc, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540, SSF52540, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51413, DBINO, 1 hit
PS51192, HELICASE_ATP_BIND_1, 1 hit
PS51194, HELICASE_CTER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q5BAZ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGAPPYHPQ SPTQQSHYAG YSPSNKPRHY YPNSEHYQQQ PPQTPPAFPQ
60 70 80 90 100
PNLARSPHYS HAPSPLPGAL PPLNGGAPTP AHPSDPSPQY QAHSAAGTPQ
110 120 130 140 150
YPLPRPYSGS LLPASGTSPY GPSTPSHAHP SSRPDSHAHV SPKKEPESHF
160 170 180 190 200
AVNHGAPAYS VMREPQASPP KEAKPARAAD PMSFASILSG PTEEQAPPKI
210 220 230 240 250
QSPTPGLGTI HSAVPAANAT SLNPPPASFH PKVGDIEPVP PVSAPRLEKK
260 270 280 290 300
PSADKRQRNT EKEDLKSAEN PTNGVTEPPK ILRPPRRIMS EKETEMVNKY
310 320 330 340 350
MVEIDNAEKS DVEAPGFEQE RERYILKGKK RALDVERAES IRRKRRRHDY
360 370 380 390 400
LLKLGKSFEK QANAGMDRFR YANEASVISE VQAKEIQDEK ERKKDMQRKR
410 420 430 440 450
RRENTVRMEM QKKLEAELKA NETQDSAEKA KFLREAERAQ RKIKTTKRAL
460 470 480 490 500
EGVTEPEEIG EITPLAPNLE GGITSSFHIG RSSPSRRKTG RGGPVTRPKK
510 520 530 540 550
SKEQKQAEKD AAEAAYAAME NDEPLPLAPR EDPRKESLKK DAKGGRSKEA
560 570 580 590 600
TPVPVSTYES KGYNQIYEQI WRDIARKDIP KVYRTKVNSL STRQENLRKT
610 620 630 640 650
AQLASKQSRK WQERTNKSMK DTQARAKRTM REMMSFWKRN EREERDLRRL
660 670 680 690 700
AEKQELESAK RAEAEREANR QKRKLNFLIS QTELYSHFIG RKIPGAGGES
710 720 730 740 750
GDAGVQGTEA MDLTPGAGAK VTNFEDLDFD AEDDTALRQA AMANAQSAVQ
760 770 780 790 800
KAQERARAFD DPNKSTMDTM DDSELNFQNP TSLGDIEISQ PTMLTAKLKE
810 820 830 840 850
YQLKGLNWLV NLYEQGINGI LADEMGLGKT IQSISVMAYL AEVHNIWGPF
860 870 880 890 900
LVIAPASTLH NWQQEITKFV PNIKVLPYWG NAKDRKILRK FWDRKHITYT
910 920 930 940 950
KESEFHVLVT SYQLVVLDAQ YFQKVKWQYM ILDEAQAIKS SQSSRWKSLL
960 970 980 990 1000
GFHCRNRLLL TGTPIQNNMQ ELWALLHFIM PTLFDSHDEF SEWFSKDIES
1010 1020 1030 1040 1050
HAQSNTKLNE DQLRRLHMIL KPFMLRRVKK HVQQELGDKV EKDVFCDLTY
1060 1070 1080 1090 1100
RQRALYTNLR NRVSIMDLIE KAAVGDETDS TTLMNLVMQF RKVCNHPDLF
1110 1120 1130 1140 1150
ERAETKSPFS LAHFAETASF NIKQSIEDDG AFSFLRFVDT SVGEAFNYSH
1160 1170 1180 1190 1200
QGVFERALRR RGQTNRLSRL SVVYDEDESS TATLPHTLFN IVDRNDRQAV
1210 1220 1230 1240 1250
YDIAVEGHMR ELMNVSRSVF EQEGLNVIEP CAGPAASAPP ITLVSSGQEA
1260 1270 1280 1290 1300
LIETQDALFN VPVQHALFGT PSKAMEEQII EQQLDPTPYS LPPMLPEPIS
1310 1320 1330 1340 1350
TKGRYTHIEV PSMRRFVTDS GKLAKLDELL RELKAGGHRV LLYFQMTRMI
1360 1370 1380 1390 1400
DLMEEYLTYR NYKYCRLDGS TKLEDRRDTV ADFQQRPDIF VFLLSTRAGG
1410 1420 1430 1440 1450
LGINLTAADT VIFYDSDWNP TIDSQAMDRA HRLGQTRQVT VYRLITRSTI
1460 1470 1480 1490 1500
EERIRKRALQ KEEVQRVVIS GGAAGGVDFN TRNRDSKTKD IAMWLADDEQ
1510 1520 1530 1540 1550
AELIEQKERE ALERGETFGA SKGGKKNAQK RKRDVTLDDM YHEGEGNFDD
1560 1570 1580 1590 1600
ASAKPSGAAT PVSTAENIGT PSASTPVPKR GRGRGGKGTA KRAKTTKERL
1610
RLIDGDGGLG SG
Length:1,612
Mass (Da):181,601
Last modified:April 26, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i236745D04E357BB5
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AACD01000038 Genomic DNA Translation: EAA64396.1
BN001307 Genomic DNA Translation: CBF86533.1

NCBI Reference Sequences

More...
RefSeqi
XP_659889.1, XM_654797.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
CBF86533; CBF86533; ANIA_02285
EAA64396; EAA64396; AN2285.2

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
2874790

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ani:AN2285.2

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACD01000038 Genomic DNA Translation: EAA64396.1
BN001307 Genomic DNA Translation: CBF86533.1
RefSeqiXP_659889.1, XM_654797.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi162425.CADANIAP00008977

Proteomic databases

PRIDEiQ5BAZ5

Genome annotation databases

EnsemblFungiiCBF86533; CBF86533; ANIA_02285
EAA64396; EAA64396; AN2285.2
GeneIDi2874790
KEGGiani:AN2285.2

Phylogenomic databases

eggNOGiKOG0388, Eukaryota
HOGENOMiCLU_000315_26_0_1
InParanoidiQ5BAZ5
KOiK11665
OMAiDDMYHEG
OrthoDBi188211at2759

Family and domain databases

Gene3Di3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR020838, DBINO
IPR014001, Helicase_ATP-bd
IPR001650, Helicase_C
IPR031047, Ino80
IPR027417, P-loop_NTPase
IPR038718, SNF2-like_sf
IPR000330, SNF2_N
PANTHERiPTHR45685:SF2, PTHR45685:SF2, 2 hits
PfamiView protein in Pfam
PF13892, DBINO, 1 hit
PF00271, Helicase_C, 1 hit
PF00176, SNF2_N, 1 hit
SMARTiView protein in SMART
SM00487, DEXDc, 1 hit
SM00490, HELICc, 1 hit
SUPFAMiSSF52540, SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51413, DBINO, 1 hit
PS51192, HELICASE_ATP_BIND_1, 1 hit
PS51194, HELICASE_CTER, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiINO80_EMENI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5BAZ5
Secondary accession number(s): C8VN32
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: April 26, 2005
Last modified: August 12, 2020
This is version 105 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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