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Entry version 129 (07 Oct 2020)
Sequence version 1 (26 Apr 2005)
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Protein
Submitted name:

Chondroitin sulfate proteoglycan 2 (Versican) variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandHyaluronic acidARBA annotation, LectinARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Chondroitin sulfate proteoglycan 2 (Versican) variantImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Extracellular matrixARBA annotation, Secreted

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA162408788

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi210 ↔ 231PROSITE-ProRule annotation
Disulfide bondi308 ↔ 329PROSITE-ProRule annotation
Disulfide bondi3129 ↔ 3138PROSITE-ProRule annotation
Disulfide bondi3167 ↔ 3176PROSITE-ProRule annotation
Disulfide bondi3310 ↔ 3353PROSITE-ProRule annotation
Disulfide bondi3339 ↔ 3366PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationARBA annotation, Glycoprotein, ProteoglycanARBA annotation

Proteomic databases

PeptideAtlas

More...
PeptideAtlasi
Q59FG9

PRoteomics IDEntifications database

More...
PRIDEi
Q59FG9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q59FG9, HS

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini48 – 160Ig-likeInterPro annotationAdd BLAST113
Domaini164 – 259LinkInterPro annotationAdd BLAST96
Domaini265 – 361LinkInterPro annotationAdd BLAST97
Domaini3103 – 3139EGF-likeInterPro annotationAdd BLAST37
Domaini3141 – 3177EGF-likeInterPro annotationAdd BLAST37
Domaini3190 – 3304C-type lectinInterPro annotationAdd BLAST115
Domaini3308 – 3368SushiInterPro annotationAdd BLAST61

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni434 – 453DisorderedSequence analysisAdd BLAST20
Regioni617 – 636DisorderedSequence analysisAdd BLAST20
Regioni821 – 843DisorderedSequence analysisAdd BLAST23
Regioni1140 – 1168DisorderedSequence analysisAdd BLAST29
Regioni1291 – 1330DisorderedSequence analysisAdd BLAST40
Regioni1434 – 1511DisorderedSequence analysisAdd BLAST78
Regioni1524 – 1553DisorderedSequence analysisAdd BLAST30
Regioni1730 – 1752DisorderedSequence analysisAdd BLAST23
Regioni1773 – 1803DisorderedSequence analysisAdd BLAST31
Regioni1976 – 2008DisorderedSequence analysisAdd BLAST33
Regioni2123 – 2148DisorderedSequence analysisAdd BLAST26
Regioni2182 – 2202DisorderedSequence analysisAdd BLAST21
Regioni2385 – 2410DisorderedSequence analysisAdd BLAST26
Regioni2459 – 2481DisorderedSequence analysisAdd BLAST23
Regioni2507 – 2532DisorderedSequence analysisAdd BLAST26
Regioni2612 – 2631DisorderedSequence analysisAdd BLAST20
Regioni2848 – 2870DisorderedSequence analysisAdd BLAST23
Regioni2895 – 2919DisorderedSequence analysisAdd BLAST25
Regioni3385 – 3410DisorderedSequence analysisAdd BLAST26

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1152 – 1168PolarSequence analysisAdd BLAST17
Compositional biasi1449 – 1467PolarSequence analysisAdd BLAST19
Compositional biasi1475 – 1494PolarSequence analysisAdd BLAST20
Compositional biasi1731 – 1746PolyampholyteSequence analysisAdd BLAST16
Compositional biasi1977 – 2008PolarSequence analysisAdd BLAST32
Compositional biasi2459 – 2477PolarSequence analysisAdd BLAST19
Compositional biasi2507 – 2531PolarSequence analysisAdd BLAST25
Compositional biasi3392 – 3410PolyampholyteSequence analysisAdd BLAST19

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the aggrecan/versican proteoglycan family.ARBA annotation

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotationARBA annotation, Immunoglobulin domainARBA annotation, RepeatARBA annotation, SushiPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

KEGG Orthology (KO)

More...
KOi
K06793

Database of Orthologous Groups

More...
OrthoDBi
74642at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00033, CCP, 1 hit
cd03588, CLECT_CSPGs, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 1 hit
3.10.100.10, 3 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001304, C-type_lectin-like
IPR016186, C-type_lectin-like/link_sf
IPR018378, C-type_lectin_CS
IPR033987, CSPG_CTLD
IPR016187, CTDL_fold
IPR001881, EGF-like_Ca-bd_dom
IPR000742, EGF-like_dom
IPR000152, EGF-type_Asp/Asn_hydroxyl_site
IPR018097, EGF_Ca-bd_CS
IPR007110, Ig-like_dom
IPR036179, Ig-like_dom_sf
IPR013783, Ig-like_fold
IPR003599, Ig_sub
IPR013106, Ig_V-set
IPR000538, Link_dom
IPR035976, Sushi/SCR/CCP_sf
IPR000436, Sushi_SCR_CCP_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00008, EGF, 2 hits
PF00059, Lectin_C, 1 hit
PF00084, Sushi, 1 hit
PF07686, V-set, 1 hit
PF00193, Xlink, 2 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR01265, LINKMODULE

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00032, CCP, 1 hit
SM00034, CLECT, 1 hit
SM00181, EGF, 2 hits
SM00179, EGF_CA, 2 hits
SM00409, IG, 1 hit
SM00445, LINK, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48726, SSF48726, 1 hit
SSF56436, SSF56436, 3 hits
SSF57535, SSF57535, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00010, ASX_HYDROXYL, 1 hit
PS00615, C_TYPE_LECTIN_1, 1 hit
PS50041, C_TYPE_LECTIN_2, 1 hit
PS00022, EGF_1, 2 hits
PS01186, EGF_2, 1 hit
PS50026, EGF_3, 2 hits
PS01187, EGF_CA, 1 hit
PS50835, IG_LIKE, 1 hit
PS01241, LINK_1, 1 hit
PS50963, LINK_2, 2 hits
PS50923, SUSHI, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

Q59FG9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
IFPPNCNKPP SKAKMFINIK SILWMCSTLI VTHALHKVKV GKSPPVRGSL
60 70 80 90 100
SGKVSLPCHF STMPTLPPSY NTSEFLRIKW SKIEVDKNGK DLKETTVLVA
110 120 130 140 150
QNGNIKIGQD YKGRVSVPTH PEAVGDASLT VVKLLASDAG LYRCDVMYGI
160 170 180 190 200
EDTQDTVSLT VDGVVFHYRA ATSRYTLNFE AAQKACLDVG AVIATPEQLF
210 220 230 240 250
AAYEDGFEQC DAGWLADQTV RYPIRAPRVG CYGDKMGKAG VRTYGFRSPQ
260 270 280 290 300
ETYDVYCYVD HLDGDVFHLT VPSKFTFEEA AKECENQDAR LATVGELQAA
310 320 330 340 350
WRNGFDQCDY GWLSDASVRH PVTVARAQCG GGLLGVRTLY RFENQTGFPP
360 370 380 390 400
PDSRFDAYCF KPKEATTIDL SILAETASPS LSKEPQMVSD RTTPIIPLVD
410 420 430 440 450
ELPVIPTEFP PVGNIVSFEQ KATVQPQAIT DSLATKLPTP TGSTKKPWDM
460 470 480 490 500
DDYSPSASGP LGKLDISEIK EEVLQSTTGV SHYATDSWDG VVEDKQTQES
510 520 530 540 550
VTQIEQIEVG PLVTSMEILK HIPSKEFPVT ETPLVTARMI LESKTEKKMV
560 570 580 590 600
STVSELVTTG HYGFTLGEED DEDRTLTVGS DESTLIFDQI PEVITVSKTS
610 620 630 640 650
EDTIHTHLED LESVSASTTV SPLIMPDNNG SSMDDWEERQ TSGRITEEFL
660 670 680 690 700
GKYLSTTPFP SQHRTEIELF PYSGDKILVE GISTVIYPSL QTEMTHRRER
710 720 730 740 750
TETLIPEMRT DTYTDEIQEE ITKSPFMGKT EEEVFSGMKL STSLSEPIHV
760 770 780 790 800
TESSVEMTKS FDFPTLITKL SAEPTEVRDM EEDFTATPGT TKYDENITTV
810 820 830 840 850
LLAHGTLSVE AATVSKWSWD EDNTTSKPLE STEPSASSKL PPALLTTVGM
860 870 880 890 900
NGKDKDIPSF TEDGADEFTL IPDSTQKQLE EVTDEDIAAH GKFTIRFQPT
910 920 930 940 950
TSTGIAEKST LRDSTTEEKV PPITSTEGQV YATMEGSALG EVEDVDLSKP
960 970 980 990 1000
VSTVPQFAHT SEVEGLAFVS YSSTQEPTTY VDSSHTIPLS VIPKTDWGVL
1010 1020 1030 1040 1050
VPSVPSEDEV LGEPSQDILV IDQTRLEATI SPETMRTTKI TEGTTQEEFP
1060 1070 1080 1090 1100
WKEQTAEKPV PALSSTAWTP KEAVTPLDEQ EGDGSAYTVS EDELLTGSER
1110 1120 1130 1140 1150
VPVLETTPVG KIDHSVSYPP GAVTEHKVKT DEVVTLTPRI GPKVSLSPGP
1160 1170 1180 1190 1200
EQKYETEGSS TTGFTSSLSP FSTHITQLME ETTTEKTSLE DIDLGSGLFE
1210 1220 1230 1240 1250
KPKATELIEF STIKVTVPSD ITTAFSSVDR LHTTSAFKPS SAITKKPPLI
1260 1270 1280 1290 1300
DREPGEETTS DMVIIGESTS HVPPTTLEDI VAKETETDID REYFTTSSPP
1310 1320 1330 1340 1350
ATQPTRPPTV EDKEAFGPQA LSTPQPPAST KFHPDINVYI IEVRENKTGR
1360 1370 1380 1390 1400
MSDLSVIGHP IDSESKEDEP CSEETDPVHD LMAEILPEFP DIIEIDLYHS
1410 1420 1430 1440 1450
EENEEEEEEC ANATDVTTTP SVQYINGKHL VTTVPKDPEA AEARRGQFES
1460 1470 1480 1490 1500
VAPSQNFSDS SESDTHPFVI AKTELSTAVQ PNESTETTES LEVTWKPETY
1510 1520 1530 1540 1550
PETSEHFSGG EPDVFPTVPF HEEFESGTAK KGAESVTERD TEVGHQAHEH
1560 1570 1580 1590 1600
TEPVSLFPEE SSGEIAIDQE SQKIAFARAT EVTFGEEVEK STSVTYTPTI
1610 1620 1630 1640 1650
VPSSASAYVS EEEAVTLIGN PWPDDLLSTK ESWVEATPRQ VVELSGSSSI
1660 1670 1680 1690 1700
PITEGSGEAE EDEDTMFTMV TDLSQRNTTD TLITLDTSRI ITESFFEVPA
1710 1720 1730 1740 1750
TTIYPVSEQP SAKVVPTKFV SETDTSEWIS STTVEEKKRK EEEGTTGTAS
1760 1770 1780 1790 1800
TFEVYSSTQR SDQLILPFEL ESPNVATSSD SGTRKSFMSL TTPTQSEREM
1810 1820 1830 1840 1850
TDSTPVFTET NTLENLGAQT TEHSSIHQPG VQEGLTTLPR SPASVFMEQG
1860 1870 1880 1890 1900
SGEAAADPET TTVSSFSLNV EYAIQAEKEV AGTLSPHVET TFSTEPTGLV
1910 1920 1930 1940 1950
LSTVMDRVVA ENITQTSREI VISERLGEPN YGAEIRGFST GFPLEEDFSG
1960 1970 1980 1990 2000
DFREYSTVSH PIAKEETVMM EGSGDAAFRD TQTSPSTVPT SVHISHISDS
2010 2020 2030 2040 2050
EGPSSTMVST SAFPWEEFTS SAEGSGEQLV TVSSSVVPVL PSAVQKFSGT
2060 2070 2080 2090 2100
ASSIIDEGLG EVGTVNEIDR RSTILPTAEV EGTKAPVEKE EVKVSGTVST
2110 2120 2130 2140 2150
NFPQTIEPAK LWSRQEVNPV RQEIESETTS EEQIQEEKSF ESPQNSPATE
2160 2170 2180 2190 2200
QTIFDSQTFT ETELKTTDYS VLTTKKTYSD DKEMKEEDTS LVNMSTPDPD
2210 2220 2230 2240 2250
ANGLESYTTL PEATEKSHFF LATALVTESI PAEHVVTDSP IKKEESTKHF
2260 2270 2280 2290 2300
PKGMRPTIQE SDTELLFSGL GSGEEVLPTL PTESVNFTEV EQINNTLYPH
2310 2320 2330 2340 2350
TSQVESTSSD KIEDFNRMEN VAKEVGPLVS QTDIFEGSGS VTSTTLIEIL
2360 2370 2380 2390 2400
SDTGAEGPTV APLPFSTDIG HPQNQTVRWA EEIQTSRPQT ITEQDSNKNS
2410 2420 2430 2440 2450
STAEINETTT SSTDFLARAY GFEMAKEFVT SAPKPSDLYY EPSGEGSGEV
2460 2470 2480 2490 2500
DIVDSFHTSA TTQATRQESS TTFVSDGSLE KHPEVPSAKA VTADGFPTVL
2510 2520 2530 2540 2550
VMLPLHSEQN KSSPDPTSTL SNTVSYERST DGSFQDRFRE FEDSTLKPNR
2560 2570 2580 2590 2600
KKPTENIIID LDKEDKDLIL TITESTILEI LPELTSDKNT IIDIDHTKPV
2610 2620 2630 2640 2650
YEDILGMQTD IDTEVPSEPH DSNDESNDDS TQVQEIYEAA VNLSLTEETF
2660 2670 2680 2690 2700
EGSADVLASY TQATHDESMT YEDRSQLDHM GFHFTTGIPA PSTETELDVL
2710 2720 2730 2740 2750
LPTATSLPIP RKSATVIPEI EGIKAEAKAL DDMFESSTLS DGQAIADQSE
2760 2770 2780 2790 2800
IIPTLGQFER TQEEYEDKKH AGPSFQPEFS SGAEEALVDH TPYLSIATTH
2810 2820 2830 2840 2850
LMDQSVTEVP DVMEGSNPPY YTDTTLAVST FAKLSSQTPS SPLTIYSGSE
2860 2870 2880 2890 2900
ASGHTEIPQP SALPGIDVGS SVMSPQDSFK EIHVNIEATF KPSSEEYLHI
2910 2920 2930 2940 2950
TEPPSLSPDT KLEPSEDDGK PELLEEMEAS PTELIAVEGT EILQDFQNKT
2960 2970 2980 2990 3000
DGQVSGEAIK MFPTIKTPEA GTVITTADEI ELEGATQWPH STSASATYGV
3010 3020 3030 3040 3050
EAGVVPWLSP QTSERPTLSS SPEINPETQA ALIRGQDSTI AASEQQVAAR
3060 3070 3080 3090 3100
ILDSNDQATV NPVEFNTEVA TPPFSLLETS NETDFLIGIN EESVEGTAIY
3110 3120 3130 3140 3150
LPGPDRCKMN PCLNGGTCYP TETSYVCTCV PGYSGDQCEL DFDECHSNPC
3160 3170 3180 3190 3200
RNGATCVDGF NTFRCLCLPS YVGALCEQDT ETCDYGWHKF QGQCYKYFAH
3210 3220 3230 3240 3250
RRTWDAAERE CRLQGAHLTS ILSHEEQMFV NRVGHDYQWI GLNDKMFEHD
3260 3270 3280 3290 3300
FRWTDGSTLQ YENWRPNQPD SFFSAGEDCV VIIWHENGQW NDVPCNYHLT
3310 3320 3330 3340 3350
YTCKKGTVAC GQPPVVENAK TFGKMKPRYE INSLIRYHCK DGFIQRHLPT
3360 3370 3380 3390 3400
IRCLGNGRWA IPKITCMNPS AYQRTYSMKY FKNSSSAKDN SINTSKHDHR
3410
WSRRWQESRR
Length:3,410
Mass (Da):374,369
Last modified:April 26, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i37872E30DF626185
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB209491 mRNA Translation: BAD92728.1

NCBI Reference Sequences

More...
RefSeqi
NP_004376.2, NM_004385.4

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
1462

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:1462

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB209491 mRNA Translation: BAD92728.1
RefSeqiNP_004376.2, NM_004385.4

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Proteomic databases

PeptideAtlasiQ59FG9
PRIDEiQ59FG9

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
1462

Genome annotation databases

GeneIDi1462
KEGGihsa:1462

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
1462
PharmGKBiPA162408788

Phylogenomic databases

KOiK06793
OrthoDBi74642at2759

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
1462, 3 hits in 867 CRISPR screens

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
1462

Gene expression databases

GenevisibleiQ59FG9, HS

Family and domain databases

CDDicd00033, CCP, 1 hit
cd03588, CLECT_CSPGs, 1 hit
Gene3Di2.60.40.10, 1 hit
3.10.100.10, 3 hits
InterProiView protein in InterPro
IPR001304, C-type_lectin-like
IPR016186, C-type_lectin-like/link_sf
IPR018378, C-type_lectin_CS
IPR033987, CSPG_CTLD
IPR016187, CTDL_fold
IPR001881, EGF-like_Ca-bd_dom
IPR000742, EGF-like_dom
IPR000152, EGF-type_Asp/Asn_hydroxyl_site
IPR018097, EGF_Ca-bd_CS
IPR007110, Ig-like_dom
IPR036179, Ig-like_dom_sf
IPR013783, Ig-like_fold
IPR003599, Ig_sub
IPR013106, Ig_V-set
IPR000538, Link_dom
IPR035976, Sushi/SCR/CCP_sf
IPR000436, Sushi_SCR_CCP_dom
PfamiView protein in Pfam
PF00008, EGF, 2 hits
PF00059, Lectin_C, 1 hit
PF00084, Sushi, 1 hit
PF07686, V-set, 1 hit
PF00193, Xlink, 2 hits
PRINTSiPR01265, LINKMODULE
SMARTiView protein in SMART
SM00032, CCP, 1 hit
SM00034, CLECT, 1 hit
SM00181, EGF, 2 hits
SM00179, EGF_CA, 2 hits
SM00409, IG, 1 hit
SM00445, LINK, 2 hits
SUPFAMiSSF48726, SSF48726, 1 hit
SSF56436, SSF56436, 3 hits
SSF57535, SSF57535, 1 hit
PROSITEiView protein in PROSITE
PS00010, ASX_HYDROXYL, 1 hit
PS00615, C_TYPE_LECTIN_1, 1 hit
PS50041, C_TYPE_LECTIN_2, 1 hit
PS00022, EGF_1, 2 hits
PS01186, EGF_2, 1 hit
PS50026, EGF_3, 2 hits
PS01187, EGF_CA, 1 hit
PS50835, IG_LIKE, 1 hit
PS01241, LINK_1, 1 hit
PS50963, LINK_2, 2 hits
PS50923, SUSHI, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ59FG9_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q59FG9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 26, 2005
Last sequence update: April 26, 2005
Last modified: October 7, 2020
This is version 129 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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