Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 125 (02 Dec 2020)
Sequence version 1 (01 Nov 1996)
Previous versions | rss
Add a publicationFeedback
Protein

Uncharacterized protein MJ0832

Gene

MJ0832

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein MJ0832
Cleaved into the following 2 chains:
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:MJ0832
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri243232 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiArchaeaEuryarchaeotaMethanomada groupMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000805 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000139991 – 337Uncharacterized protein MJ0832, 1st partSequence analysisAdd BLAST337
ChainiPRO_0000014000338 – 790Mja rnr-1 inteinSequence analysisAdd BLAST453
ChainiPRO_0000014001791 – 1058Uncharacterized protein MJ0832, 2nd partSequence analysisAdd BLAST268
ChainiPRO_00000140021059 – 1591Mja rnr-2 inteinSequence analysisAdd BLAST533
ChainiPRO_00000140031592 – 1750Uncharacterized protein MJ0832, 3rd partSequence analysisAdd BLAST159

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

This protein undergoes a protein self splicing that involves a post-translational excision of the intervening region (intein) followed by peptide ligation.Curated

Keywords - PTMi

Autocatalytic cleavage, Protein splicing

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
243232.MJ_0832

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q58242

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini14 – 101ATP-conePROSITE-ProRule annotationAdd BLAST88
Domaini507 – 634DOD-type homing endonuclease 1PROSITE-ProRule annotationAdd BLAST128
Domaini1286 – 1426DOD-type homing endonuclease 2PROSITE-ProRule annotationAdd BLAST141

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
arCOG03145, Archaea
arCOG03154, Archaea
arCOG03714, Archaea
arCOG04889, Archaea

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002707_0_0_2

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q58242

Identification of Orthologs from Complete Genome Data

More...
OMAi
EDHSLFN

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.10.28.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR005144, ATP-cone_dom
IPR003586, Hint_dom_C
IPR003587, Hint_dom_N
IPR036844, Hint_dom_sf
IPR027434, Homing_endonucl
IPR006142, INTEIN
IPR030934, Intein_C
IPR004042, Intein_endonuc
IPR006141, Intein_N
IPR004860, LAGLIDADG_2
IPR012833, NrdD
IPR039518, WhiA_LAGLIDADG_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03477, ATP-cone, 2 hits
PF14528, LAGLIDADG_3, 2 hits
PF14527, LAGLIDADG_WhiA, 1 hit
PF13597, NRDD, 3 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00379, INTEIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00305, HintC, 2 hits
SM00306, HintN, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51294, SSF51294, 2 hits
SSF55608, SSF55608, 3 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01443, intein_Cterm, 2 hits
TIGR01445, intein_Nterm, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51161, ATP_CONE, 1 hit
PS50818, INTEIN_C_TER, 2 hits
PS50819, INTEIN_ENDONUCLEASE, 2 hits
PS50817, INTEIN_N_TER, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q58242-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MISAKDFAEK VMEFYVIKRD KRKEKFNVNK LAKSLINSGV NYGDLDTIIS
60 70 80 90 100
EVCAKVYNGI TTDELKDIVY NVLKKIDKDV AENYRNGIIL KVRTSEKEFE
110 120 130 140 150
SFDKEKIAKA LIRETGADEE TARKIADEVE RELKKLKVKY LTAPMIREIV
160 170 180 190 200
NYKLIEYGFE ELRHKHTRLG MPVYDITKLI KSGSRENANL MYNPESIHKW
210 220 230 240 250
VADETMKQYA LLAIFPKHIA DAHIKGDIHL HDLEYAATRP VCLQHDLRPF
260 270 280 290 300
FKYGLKVDGT GLHTSVSKPA KHPEVAIQHA AKVMMAAQTN MSGGQSIDEF
310 320 330 340 350
NVWLAPYVRG LSYEKIKQLM QMFIYELNQM YVARGGQSLG RDELIFIKEG
360 370 380 390 400
DKLKVCKIGE AIDEFMEKYK DKIIVDGDTE ILYLDGIAEV YTISVNVKTG
410 420 430 440 450
KAEFKRVYAI SRHKPRGKVY KVIGKDGTSI IVTEDHSLFN YDENGNLVCV
460 470 480 490 500
KPRQMKHIIR NFNNPYDVEY RIGDYIETNY QRTDSKYNSR QNDIPEKLKI
510 520 530 540 550
TKELCQFLGL FVAEGSYITN GISITTKDDD IAKFIERFVK EQINENIAVK
560 570 580 590 600
RYEDSVRFVN KGFYRFLKEH INGKAINKNS PEFILKGDKE MKLAFLGGLI
610 620 630 640 650
SGDGYVSKDG RVQIYTTSEQ LLGQLHLLLS DLGMIYSITK IKEEGEKIEI
660 670 680 690 700
KRNEIVRNYK LYVIEIAKNC TEDLKPYVIP KYKKERIKPA NYDQLPYDYR
710 720 730 740 750
IIKEHLRKIT DKKPYNDYAW KSNNRKLKLN TLEKIEQLNP HLREEINKFK
760 770 780 790 800
LNIPFEIKEI KEIDYNGYVY DLSVEDNENF ITATGILCHN TIFSSINLEL
810 820 830 840 850
EIPEFLKDKP AVIAGTTRGT YGDYEEEAKL ILEALVDVMM EGDAMGKPFL
860 870 880 890 900
FPNFIIKLRE NAFKDENKEL MYKIHQLSAK FGIPYFINML PDWQVTNTNA
910 920 930 940 950
MGCRTRLSGN WTGDAEIDTL RTGNMQWYSL NLPRIAYEAN GDDTKLFEIL
960 970 980 990 1000
HERLEILKEA LLIKHEVTKE RLYVDNLMPF LTQEFDGESY YRYENTTKTF
1010 1020 1030 1040 1050
GFVGLNEMLK YHLGEELHES KDAVKFGEKV IEYIREYADK LKEETGLRWT
1060 1070 1080 1090 1100
VTQTPAESSL PYDEKILIFE NNEYKLVKIG EFVEKYLNRY KDRAITYGDN
1110 1120 1130 1140 1150
NIEVYIKDEN IYAPSFDKDG KIVLKPITHA IRHRGKEIYE IELESGKKVR
1160 1170 1180 1190 1200
VTGDHSVFTI NDNLDVVEVK ASDLKVGDFI ITPKIIPSIS KDKIYLSEIV
1210 1220 1230 1240 1250
KNKDKYYVKI KDHIKFIEEH EEILKESYKE YKTKWKDLKP VLKKKNAFRL
1260 1270 1280 1290 1300
DLIEDLVDKE KIEKISYGHA NYINNKIKLD EKFGYLIGAF LSEGHWNDKC
1310 1320 1330 1340 1350
VEISSTNKEF IENLVEIIEE ILGKDAYYIT VKGDKRRYKD LYVIGLNKTV
1360 1370 1380 1390 1400
AMIFESLGLN KLSSNKEIPS ILLSNETFLK GLIKGYIDGD GSIYVDESKR
1410 1420 1430 1440 1450
DYSIRLYTTS ETLRDTLCLA LKILGINYRL SIDKKSKVNE NWRDCYVIKI
1460 1470 1480 1490 1500
TGKENIEKLL DVEIKNNGGK DVIPKIAEKF KEIINQYSQR EWKERFGIDV
1510 1520 1530 1540 1550
NNLHIWEDLK KGYMSRYRAK KVLNIMKNVK EIEEKYGRLL DKIGQLIDND
1560 1570 1580 1590 1600
LLFERIKSIR VLDEIPEYVY DISVEGTENF IGGEGFICLH NTAGRFARLD
1610 1620 1630 1640 1650
YKYYKEETIS VVRGDLNDVD SLYYTNSSHV RVDAPITLGE KVRIEEKFHP
1660 1670 1680 1690 1700
LCNGGHIMHI WNIESAADPE VLMDITKKIT KTHIGFWTYT KNLSVCNRCG
1710 1720 1730 1740 1750
ISMGGLRDRC INCGSEDVAK FSRITGYLQN ISNWNRAKQK ELEDRKLPRI
Length:1,750
Mass (Da):203,281
Last modified:November 1, 1996 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6D6893B770A25359
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
L77117 Genomic DNA Translation: AAB98834.1

Protein sequence database of the Protein Information Resource

More...
PIRi
H64403

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AAB98834; AAB98834; MJ_0832

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mja:MJ_0832

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA Translation: AAB98834.1
PIRiH64403

3D structure databases

SMRiQ58242
ModBaseiSearch...

Protein-protein interaction databases

STRINGi243232.MJ_0832

Genome annotation databases

EnsemblBacteriaiAAB98834; AAB98834; MJ_0832
KEGGimja:MJ_0832

Phylogenomic databases

eggNOGiarCOG03145, Archaea
arCOG03154, Archaea
arCOG03714, Archaea
arCOG04889, Archaea
HOGENOMiCLU_002707_0_0_2
InParanoidiQ58242
OMAiEDHSLFN

Family and domain databases

Gene3Di3.10.28.10, 2 hits
InterProiView protein in InterPro
IPR005144, ATP-cone_dom
IPR003586, Hint_dom_C
IPR003587, Hint_dom_N
IPR036844, Hint_dom_sf
IPR027434, Homing_endonucl
IPR006142, INTEIN
IPR030934, Intein_C
IPR004042, Intein_endonuc
IPR006141, Intein_N
IPR004860, LAGLIDADG_2
IPR012833, NrdD
IPR039518, WhiA_LAGLIDADG_dom
PfamiView protein in Pfam
PF03477, ATP-cone, 2 hits
PF14528, LAGLIDADG_3, 2 hits
PF14527, LAGLIDADG_WhiA, 1 hit
PF13597, NRDD, 3 hits
PRINTSiPR00379, INTEIN
SMARTiView protein in SMART
SM00305, HintC, 2 hits
SM00306, HintN, 2 hits
SUPFAMiSSF51294, SSF51294, 2 hits
SSF55608, SSF55608, 3 hits
TIGRFAMsiTIGR01443, intein_Cterm, 2 hits
TIGR01445, intein_Nterm, 2 hits
PROSITEiView protein in PROSITE
PS51161, ATP_CONE, 1 hit
PS50818, INTEIN_C_TER, 2 hits
PS50819, INTEIN_ENDONUCLEASE, 2 hits
PS50817, INTEIN_N_TER, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiY832_METJA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q58242
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: December 2, 2020
This is version 125 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Intein-containing proteins
    List of intein-containing protein entries
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again