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Protein

Protein NRT1/ PTR FAMILY 4.4

Gene

NPF4.4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NRT1/ PTR FAMILY 4.4
Short name:
AtNPF4.4
Alternative name(s):
Nitrate transporter 1.13
Gene namesi
Name:NPF4.4
Synonyms:NRT1.13
Ordered Locus Names:At1g33440
ORF Names:F10C21.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G33440
TAIRilocus:2006907 AT1G33440

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei44 – 64HelicalSequence analysisAdd BLAST21
Transmembranei82 – 102HelicalSequence analysisAdd BLAST21
Transmembranei113 – 133HelicalSequence analysisAdd BLAST21
Transmembranei160 – 180HelicalSequence analysisAdd BLAST21
Transmembranei198 – 218HelicalSequence analysisAdd BLAST21
Transmembranei228 – 248HelicalSequence analysisAdd BLAST21
Transmembranei337 – 357HelicalSequence analysisAdd BLAST21
Transmembranei386 – 406HelicalSequence analysisAdd BLAST21
Transmembranei420 – 440HelicalSequence analysisAdd BLAST21
Transmembranei453 – 473HelicalSequence analysisAdd BLAST21
Transmembranei493 – 513HelicalSequence analysisAdd BLAST21
Transmembranei544 – 564HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003999491 – 601Protein NRT1/ PTR FAMILY 4.4Add BLAST601

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei112PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ56XQ6

PTM databases

iPTMnetiQ56XQ6

Expressioni

Tissue specificityi

Expressed in shoots, roots and stems.1 Publication

Gene expression databases

ExpressionAtlasiQ56XQ6 baseline and differential
GenevisibleiQ56XQ6 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G33440.1

Structurei

3D structure databases

ProteinModelPortaliQ56XQ6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1237 Eukaryota
COG3104 LUCA
HOGENOMiHOG000237400
InParanoidiQ56XQ6
OMAiKTQGKAM
OrthoDBiEOG093605QM
PhylomeDBiQ56XQ6

Family and domain databases

InterProiView protein in InterPro
IPR036259 MFS_trans_sf
IPR000109 POT_fam
PANTHERiPTHR11654 PTHR11654, 1 hit
PfamiView protein in Pfam
PF00854 PTR2, 1 hit
SUPFAMiSSF103473 SSF103473, 2 hits

Sequencei

Sequence statusi: Complete.

Q56XQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG
60 70 80 90 100
FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
110 120 130 140 150
FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC
160 170 180 190 200
VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
210 220 230 240 250
AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF
260 270 280 290 300
YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
310 320 330 340 350
HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII
360 370 380 390 400
FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
410 420 430 440 450
TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE
460 470 480 490 500
QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
510 520 530 540 550
SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA
560 570 580 590 600
SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR

I
Length:601
Mass (Da):66,705
Last modified:May 10, 2005 - v1
Checksum:i970E0562F32D643D
GO

Sequence cautioni

The sequence AAG51210 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC051630 Genomic DNA Translation: AAG51210.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE31595.1
AK221617 mRNA Translation: BAD95216.1
PIRiB86458
RefSeqiNP_174610.2, NM_103069.4
UniGeneiAt.49935

Genome annotation databases

EnsemblPlantsiAT1G33440.1; AT1G33440.1; AT1G33440
GeneIDi840237
GrameneiAT1G33440.1; AT1G33440.1; AT1G33440
KEGGiath:AT1G33440

Similar proteinsi

Entry informationi

Entry nameiPTR15_ARATH
AccessioniPrimary (citable) accession number: Q56XQ6
Secondary accession number(s): Q9C808
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: May 10, 2005
Last modified: April 25, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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