Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein archease

Gene

zbtb8os

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RTCB. Together with ddx1, acts by facilitating the guanylylation of RTCB, a key intermediate step in tRNA ligation (By similarity).By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi34CalciumBy similarity1
Metal bindingi161CalciumBy similarity1
Metal bindingi162Calcium; via carboxylateBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processtRNA processing
LigandCalcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Protein archease
Alternative name(s):
Protein zbtb8os
Gene namesi
Name:zbtb8os
ORF Names:si:dkeyp-2e4.1, zgc:112460
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 13

Organism-specific databases

ZFINiZDB-GENE-050417-176 zbtb8os

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002859521 – 162Protein archeaseAdd BLAST162

Proteomic databases

PaxDbiQ566V0

Expressioni

Gene expression databases

BgeeiENSDARG00000016368 Expressed in 17 organ(s), highest expression level in intestine

Interactioni

Subunit structurei

Component of the tRNA-splicing ligase complex.By similarity

Protein-protein interaction databases

STRINGi7955.ENSDARP00000020953

Structurei

3D structure databases

ProteinModelPortaliQ566V0
SMRiQ566V0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the archease family.Curated

Phylogenomic databases

eggNOGiKOG4528 Eukaryota
COG1371 LUCA
GeneTreeiENSGT00390000003245
HOGENOMiHOG000229617
HOVERGENiHBG104905
InParanoidiQ566V0
OMAiYSAMQIH
OrthoDBiEOG091G0QBN
PhylomeDBiQ566V0
TreeFamiTF105957

Family and domain databases

Gene3Di3.55.10.10, 1 hit
InterProiView protein in InterPro
IPR002804 Archease
IPR023572 Archease_dom
IPR036820 Archease_dom_sf
PANTHERiPTHR12682 PTHR12682, 1 hit
PfamiView protein in Pfam
PF01951 Archease, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012969 PD012969, 1 hit
SUPFAMiSSF69819 SSF69819, 1 hit

Sequencei

Sequence statusi: Complete.

Q566V0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDRELDLTE EQKALKAKYP PITKKYEYLD HTADVQIHSW GNSLEEAFEQ
60 70 80 90 100
CAMGMFGYMT DTETVEPIDT VEVESEGDDM ESLLYHFLDD WLFKFSADIF
110 120 130 140 150
FIPREVKVLH IDRMRYKIRS IGWGEEFSIN KHPQGTEVKA ITYSAMQIHE
160
TEQPEIFVII DI
Length:162
Mass (Da):19,020
Last modified:December 4, 2007 - v2
Checksum:i91771170C0C1A846
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti55M → V in AAH93322 (Ref. 2) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR376783, CR786566 Genomic DNA Translation: CAM12942.1
CR786566, CR376783 Genomic DNA Translation: CAM12945.1
BC093322 mRNA Translation: AAH93322.1
RefSeqiNP_001017687.1, NM_001017687.1
UniGeneiDr.10898

Genome annotation databases

EnsembliENSDART00000017770; ENSDARP00000020953; ENSDARG00000016368
GeneIDi550382
KEGGidre:550382

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR376783, CR786566 Genomic DNA Translation: CAM12942.1
CR786566, CR376783 Genomic DNA Translation: CAM12945.1
BC093322 mRNA Translation: AAH93322.1
RefSeqiNP_001017687.1, NM_001017687.1
UniGeneiDr.10898

3D structure databases

ProteinModelPortaliQ566V0
SMRiQ566V0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000020953

Proteomic databases

PaxDbiQ566V0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000017770; ENSDARP00000020953; ENSDARG00000016368
GeneIDi550382
KEGGidre:550382

Organism-specific databases

CTDi339487
ZFINiZDB-GENE-050417-176 zbtb8os

Phylogenomic databases

eggNOGiKOG4528 Eukaryota
COG1371 LUCA
GeneTreeiENSGT00390000003245
HOGENOMiHOG000229617
HOVERGENiHBG104905
InParanoidiQ566V0
OMAiYSAMQIH
OrthoDBiEOG091G0QBN
PhylomeDBiQ566V0
TreeFamiTF105957

Miscellaneous databases

PROiPR:Q566V0

Gene expression databases

BgeeiENSDARG00000016368 Expressed in 17 organ(s), highest expression level in intestine

Family and domain databases

Gene3Di3.55.10.10, 1 hit
InterProiView protein in InterPro
IPR002804 Archease
IPR023572 Archease_dom
IPR036820 Archease_dom_sf
PANTHERiPTHR12682 PTHR12682, 1 hit
PfamiView protein in Pfam
PF01951 Archease, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012969 PD012969, 1 hit
SUPFAMiSSF69819 SSF69819, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiARCH_DANRE
AccessioniPrimary (citable) accession number: Q566V0
Secondary accession number(s): A2CE72
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: December 4, 2007
Last modified: September 12, 2018
This is version 69 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again