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Protein

Nucleolar protein 58

Gene

nop58

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Required for 60S ribosomal subunit biogenesis.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processRibosome biogenesis

Enzyme and pathway databases

ReactomeiR-DDI-4570464 SUMOylation of RNA binding proteins
R-DDI-6791226 Major pathway of rRNA processing in the nucleolus and cytosol

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleolar protein 58
Alternative name(s):
Nucleolar protein 5
Gene namesi
Name:nop58
Synonyms:nol5, nop5
ORF Names:DDB_G0268098
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyostelidsDictyostelialesDictyosteliaceaeDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 1, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0268098 nop58

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003312071 – 638Nucleolar protein 58Add BLAST638

Proteomic databases

PaxDbiQ55FI4
PRIDEiQ55FI4

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB0305289

Structurei

3D structure databases

ProteinModelPortaliQ55FI4
SMRiQ55FI4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini284 – 402NopPROSITE-ProRule annotationAdd BLAST119

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi441 – 484Ser-richAdd BLAST44
Compositional biasi474 – 630Glu/Lys-richAdd BLAST157

Sequence similaritiesi

Belongs to the NOP5/NOP56 family.Curated

Phylogenomic databases

eggNOGiKOG2572 Eukaryota
COG1498 LUCA
InParanoidiQ55FI4
KOiK14565
OMAiDINQFAM
PhylomeDBiQ55FI4

Family and domain databases

Gene3Di1.10.287.660, 2 hits
InterProiView protein in InterPro
IPR029012 Helix_hairpin_bin_sf
IPR012974 NOP5_N
IPR002687 Nop_dom
IPR036070 Nop_dom_sf
IPR012976 NOSIC
PfamiView protein in Pfam
PF01798 Nop, 1 hit
PF08156 NOP5NT, 1 hit
SMARTiView protein in SMART
SM00931 NOSIC, 1 hit
SUPFAMiSSF89124 SSF89124, 1 hit
PROSITEiView protein in PROSITE
PS51358 NOP, 1 hit

Sequencei

Sequence statusi: Complete.

Q55FI4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLVLFETSAG FALFKVLDEG KMKSKPVDIN NFFETPEKAS SFVSLKKFYK
60 70 80 90 100
FDGTLDALEA QTAIAECKVP ESLSNFLKKN VVSEKLNEQL IVSDSKFGNA
110 120 130 140 150
IKDALNIKVL CDDTTQELIR GIRLQLKSLV NANEQDLNAM SIGLSHSYSR
160 170 180 190 200
YKLKFSPDKV DTMIVQAISL LDDLTTEINI YAMRAREWYG WHFPELGKLI
210 220 230 240 250
TNHTQYANAI KAMGNRKSAV DTDFTDILPE EVAEEVKEAA QISMGTEISP
260 270 280 290 300
EDLDHIFALC DQFLSIQAYH TELTEYLKSR MEAIAPNLTI LVGEIVGARL
310 320 330 340 350
ICRAGSLMNL AKYPASTIQI LGAEKALFRA LKTKHNTPKY GLIYNAKIVG
360 370 380 390 400
EASLKNKGKM SRVLAAKAAL SARFDALCEV SDTSYGIAYK GAVDRRAAAI
410 420 430 440 450
EGREVRKSLN AVKPEKSGNV AKYDHTKSAT TNTTRDVATK SSKESSIKQE
460 470 480 490 500
KQDVKMEEAS SSDSDSSSDS DSSEEEKSKK SKKSKKEETP VAKEEKKEKK
510 520 530 540 550
SKKEETPVAK EEKKEKEEKK EKKDKKEKKE EKEDKKEEKK EKKDKKEKTE
560 570 580 590 600
ETPVAKEEKK EKKEKKEEKE EKKDKKEKKE KKEEKEEKKE KKEKKSSSKE
610 620 630
DKKEKEEKKE KKSSSKEDKK RKDRDEEPEE KKSKKSKK
Length:638
Mass (Da):72,336
Last modified:May 24, 2005 - v1
Checksum:iADF925E316A2718C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000003 Genomic DNA Translation: EAL73502.1
RefSeqiXP_647549.1, XM_642457.1

Genome annotation databases

EnsemblProtistsiEAL73502; EAL73502; DDB_G0268098
GeneIDi8616357
KEGGiddi:DDB_G0268098

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000003 Genomic DNA Translation: EAL73502.1
RefSeqiXP_647549.1, XM_642457.1

3D structure databases

ProteinModelPortaliQ55FI4
SMRiQ55FI4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0305289

Proteomic databases

PaxDbiQ55FI4
PRIDEiQ55FI4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAL73502; EAL73502; DDB_G0268098
GeneIDi8616357
KEGGiddi:DDB_G0268098

Organism-specific databases

dictyBaseiDDB_G0268098 nop58

Phylogenomic databases

eggNOGiKOG2572 Eukaryota
COG1498 LUCA
InParanoidiQ55FI4
KOiK14565
OMAiDINQFAM
PhylomeDBiQ55FI4

Enzyme and pathway databases

ReactomeiR-DDI-4570464 SUMOylation of RNA binding proteins
R-DDI-6791226 Major pathway of rRNA processing in the nucleolus and cytosol

Miscellaneous databases

PROiPR:Q55FI4

Family and domain databases

Gene3Di1.10.287.660, 2 hits
InterProiView protein in InterPro
IPR029012 Helix_hairpin_bin_sf
IPR012974 NOP5_N
IPR002687 Nop_dom
IPR036070 Nop_dom_sf
IPR012976 NOSIC
PfamiView protein in Pfam
PF01798 Nop, 1 hit
PF08156 NOP5NT, 1 hit
SMARTiView protein in SMART
SM00931 NOSIC, 1 hit
SUPFAMiSSF89124 SSF89124, 1 hit
PROSITEiView protein in PROSITE
PS51358 NOP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiNOP58_DICDI
AccessioniPrimary (citable) accession number: Q55FI4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: May 24, 2005
Last modified: May 23, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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