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Protein
Submitted name:

NADH dehydrogenase subunit 5

Gene

ndhF

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenase subunit 5Imported
Gene namesi
Name:ndhFImported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 28HelicalSequence analysisAdd BLAST17
Transmembranei40 – 62HelicalSequence analysisAdd BLAST23
Transmembranei90 – 110HelicalSequence analysisAdd BLAST21
Transmembranei122 – 148HelicalSequence analysisAdd BLAST27
Transmembranei185 – 203HelicalSequence analysisAdd BLAST19
Transmembranei286 – 306HelicalSequence analysisAdd BLAST21
Transmembranei318 – 341HelicalSequence analysisAdd BLAST24
Transmembranei347 – 365HelicalSequence analysisAdd BLAST19
Transmembranei377 – 399HelicalSequence analysisAdd BLAST23
Transmembranei411 – 431HelicalSequence analysisAdd BLAST21
Transmembranei452 – 476HelicalSequence analysisAdd BLAST25
Transmembranei496 – 517HelicalSequence analysisAdd BLAST22
Transmembranei567 – 589HelicalSequence analysisAdd BLAST23
Transmembranei595 – 614HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ55465

Interactioni

Protein-protein interaction databases

IntActiQ55465, 2 interactors
STRINGi1148.SYNGTS_2846

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini70 – 126Proton_antipo_NInterPro annotationAdd BLAST57
Domaini139 – 424Proton_antipo_MInterPro annotationAdd BLAST286

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000100571
KOiK05577
OMAiFWYAQPL
PhylomeDBiQ55465

Family and domain databases

InterProiView protein in InterPro
IPR010217 NADP_DH_NdhF3_su
IPR001750 ND/Mrp_mem
IPR001516 Proton_antipo_N
PfamiView protein in Pfam
PF00361 Proton_antipo_M, 1 hit
PF00662 Proton_antipo_N, 1 hit
TIGRFAMsiTIGR01960 ndhF3_CO2, 1 hit

Sequencei

Sequence statusi: Complete.

Q55465-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDFLLQSSW FIPFYGLIGS ILSLPWSFRL IKQTGPRPAA YFNVFMTLVS
60 70 80 90 100
AIHGMVALSA IWQTPSEQIV FHWLQVADLD LTLAVEISPV SLGALSVVTG
110 120 130 140 150
ISFLVQIFGL GYMEKDWSLA RFYGLLGFFE AALGGIALSD SLFLSYGLLE
160 170 180 190 200
MLTLSTYLLV GFWYAQPLVV TAARDAFLTK RVGDIILLMG VVALSSYGQG
210 220 230 240 250
LTFSQLDNWA STVPVTGITA TLLGLSLIAG PTGKCAQFPL NLWLDEAMEG
260 270 280 290 300
PNPAGIMRNS VVVSAGAYVL IKLQPVFTLS PIASKTLIVL GTLTVVMTSL
310 320 330 340 350
IAIAQIDIKR TLSHSTSVYL GLVFIAVGLG QVDIAFLLLF AHAIAKALLF
360 370 380 390 400
MSIGSIIFTT SGQNITEMGG LWNRMPVTTT SFVVGSAGLL AVFPLGMFWT
410 420 430 440 450
WQKWFSGDWL VSWPLLALLI FVNLFSALNL TRVFRLVFLG KPQPKTRRAP
460 470 480 490 500
EVPWPMAVPM VSLIIVTLLV PIAPLQWSFW LSATYPLGLT SPVTQWAMPL
510 520 530 540 550
LMVAGITGIL LGSLMPLRRN LSRSSRLPVR FLQDLFAYDV YLDKIYGATV
560 570 580 590 600
VAAVAAIAKI STWFDRYVID GIVNLVSLVT IFSGSALKYN VTGQSQFYLL
610 620 630
TILVGVALLI WFSLSGQWMA IRQFWSSWLS LILP
Length:634
Mass (Da):69,363
Last modified:November 1, 1996 - v1
Checksum:i269F8314CCDE1479
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA Translation: BAA10809.1
PIRiS75962

Genome annotation databases

EnsemblBacteriaiBAA10809; BAA10809; BAA10809
KEGGisyn:sll0026

Similar proteinsi

Entry informationi

Entry nameiQ55465_SYNY3
AccessioniPrimary (citable) accession number: Q55465
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: January 31, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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