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UniProtKB - Q54V85 (Y6038_DICDI)

Entry version 48 (02 Dec 2020)
Sequence version 2 (08 Mar 2011)
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Protein

Putative uncharacterized protein DDB_G0280555

Gene

DDB_G0280555

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Putative uncharacterized protein DDB_G0280555
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:DDB_G0280555
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDictyostelium discoideum (Slime mold)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri44689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Amoebozoa › Evosea › Eumycetozoa › Dictyostelia › Dictyosteliales › Dictyosteliaceae › Dictyostelium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002195 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componentsi: Chromosome 3, Unassembled WGS sequence

Organism-specific databases

Dictyostelium discoideum online informatics resource

More...dictyBasei		DDB_G0280555

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003524421 – 1469Putative uncharacterized protein DDB_G0280555Add BLAST1469

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q54V85

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		44689.DDB0206039

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi12 – 127Asn-richAdd BLAST116
Compositional biasi46 – 193Glu-richAdd BLAST148
Compositional biasi153 – 176Poly-GluAdd BLAST24
Compositional biasi189 – 256Asn-richAdd BLAST68
Compositional biasi212 – 215Poly-Ile4
Compositional biasi294 – 333Thr-richAdd BLAST40
Compositional biasi426 – 1186Asn-richAdd BLAST761
Compositional biasi653 – 726Thr-richAdd BLAST74
Compositional biasi895 – 907Thr-richAdd BLAST13
Compositional biasi1331 – 1339Poly-Ser9
Compositional biasi1356 – 1371Asn-richAdd BLAST16

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q54V85-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLVTYNGHVD DNSINNQIIE NNVQTDDLNN SFDNHKDQIE LKSYKETENI 
        60         70         80         90        100
ETENIETENK EVETINNEII KISQEIEISK SQEIDKTNNN INEQNNDNFE 
       110        120        130        140        150
IPEKELQEIE ACPCNKNIII NDSNNYNVTI IQNDDSIVIE NCTDCGDHIT 
       160        170        180        190        200
PKEEEEKEKE KEKEKEKEKE KEKEKEKDSE ESLQEQCLNK ENESIDNDNN 
       210        220        230        240        250
NNIINNNNND SIIIIKESTD DKKEIPSIEC IQNNQNNQNN NDSPINKEIE 
       260        270        280        290        300
DDNNNNIEKD GADIHIKEEQ VEKVQVEEKE VEEIQVKDNA NSVTSTIVTA 
       310        320        330        340        350
TDVTTTTTTT TTTTSSSNNC TNSISNTDKS TTTNCPPVEN GGDSDGKLMY 
       360        370        380        390        400
PLYKKVFGNK TISKLIFKNI RKIQRFKSIT IESPSSPLPL SDIHGYGQVK 
       410        420        430        440        450
SYSNITFEYM VFNWMIDLLH DKIVKNNEDL NFNNNNNNNN NNNNNNNNNS 
       460        470        480        490        500
QPYHYQLKGS QSHEILLKNL KPNDENSKQL LKSFFKKYCD RNSILKKLTE 
       510        520        530        540        550
YNNPLLTKLV LKDYLNDFKP VKNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
       560        570        580        590        600
NNNNNINNNS YFYKSVPNEL LFNLILQQGE IKLVKQVLNG KYKELKLNQM 
       610        620        630        640        650
SIHYALKSTL KNEIIQYIIN NNRKELSQLY LKSNKCIVGS RRLFLSIFVP 
       660        670        680        690        700
PPTTTTTTTN TNSTNTNSTI NATSPPHTPK LSSSPLLTTT TTPPASPTQS 
       710        720        730        740        750
RIPLVRTLTQ LPSRIPLVRT QTQLQTKIQP KSPQPQPTAA PEPQKPPTPS 
       760        770        780        790        800
IVKNQMHSQI NITPQTKDYI EIGEMIGFEF RIFLELFEVT FPNVPKFRIT 
       810        820        830        840        850
ESCVDSLKEL VLKRSIENQN NKSIYSFDVL FDIFRITLHL VLIGCLKLIG 
       860        870        880        890        900
DHENNNYNNN NNYNNNINNI NYNNNINNNS YNNINNNNYN NNNKTTTTTT 
       910        920        930        940        950
TTTTTTTANS NKSKTNKNKN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
       960        970        980        990       1000
NNEKNIINND NNINNNEIDI SKDKKDLVKF RAIFNQINNL RQTYLFKKKN 
      1010       1020       1030       1040       1050
QEFEIEIKKL FFLDFIPLFG FNEKLLFEKS CLKIDLLHEE KKYGWIIGQE 
      1060       1070       1080       1090       1100
EQPNTLFIKE QLIKSSYEKL DANLFGLSVF LFGIERFSSG SQWFSYPNKI 
      1110       1120       1130       1140       1150
VNNKITNGPY NGNLDKQIQF LEGMIENCKT YKLFDRNETI GIIEAILNSI 
      1160       1170       1180       1190       1200
VITIQNNNDN NNNNNNNNNN NNNNNNNNNN NNNNYNIISI FEKKIQKLLG 
      1210       1220       1230       1240       1250
NCPIKVGAHS LFHSLELIEF CFNNCRDLIN FSCCDSMNTL YRDSKFLSII 
      1260       1270       1280       1290       1300
EFYHRNNLFF GNCSMEIGKS RKRSIAEKIY SFGYRFSNNL IPLAVYNDRE 
      1310       1320       1330       1340       1350
SGYLFYYAVE KFIIEKLFNG DGSDYDESNC SSSSSSSESN GIDSGSESGR 
      1360       1370       1380       1390       1400
GRCRSNTTNN SNNINNSSNN NQRFQLHFLL SGNSIPRVIK RNEIFLPTNS 
      1410       1420       1430       1440       1450
KLKWFNLLLS SCGELFTYFP SNEGLCSDFD TPKTNFNLNY EEFYILKFIT 
      1460 
PFLYKKFKNS FSIKKDFYH
Length:1,469
Mass (Da):169,214
Last modified:March 8, 2011 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i561994EF841A4B91
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence EAL67078 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence EAL67079 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AAFI02000037 Genomic DNA Translation: EAL67078.1 Sequence problems.
AAFI02000037 Genomic DNA Translation: EAL67079.1 Sequence problems.

NCBI Reference Sequences

More...RefSeqi		XP_641046.1, XM_635954.1
XP_641047.1, XM_635955.1

Genome annotation databases

Ensembl protists genome annotation project

More...EnsemblProtistsi		EAL67078; EAL67078; DDB_G0280553
EAL67079; EAL67079; DDB_G0280555

Database of genes from NCBI RefSeq genomes

More...GeneIDi		8622604
8622605

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ddi:DDB_G0280553
ddi:DDB_G0280555

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000037 Genomic DNA Translation: EAL67078.1 Sequence problems.
AAFI02000037 Genomic DNA Translation: EAL67079.1 Sequence problems.
RefSeqiXP_641046.1, XM_635954.1
XP_641047.1, XM_635955.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi44689.DDB0206039

Proteomic databases

PaxDbiQ54V85

Genome annotation databases

EnsemblProtistsiEAL67078; EAL67078; DDB_G0280553
EAL67079; EAL67079; DDB_G0280555
GeneIDi8622604
8622605
KEGGiddi:DDB_G0280553
ddi:DDB_G0280555

Organism-specific databases

dictyBaseiDDB_G0280555

Miscellaneous databases

Protein Ontology

More...PROi		PR:Q54V85

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiY6038_DICDI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q54V85
Secondary accession number(s): Q54V84
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: March 8, 2011
Last modified: December 2, 2020
This is version 48 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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