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UniProtKB - Q54TP6 (Y8322_DICDI)

Entry version 48 (02 Dec 2020)
Sequence version 2 (05 Apr 2011)
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Protein

Putative uncharacterized protein DDB_G0281631

Gene

DDB_G0281631

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein uncertaini <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

Could be the product of a pseudogene.Curated

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Putative uncharacterized protein DDB_G0281631
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:DDB_G0281631
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDictyostelium discoideum (Slime mold)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri44689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Amoebozoa › Evosea › Eumycetozoa › Dictyostelia › Dictyosteliales › Dictyosteliaceae › Dictyostelium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002195 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componentsi: Chromosome 3, Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003524881 – 804Putative uncharacterized protein DDB_G0281631Add BLAST804

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q54TP6

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q54TP6

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi8 – 23Poly-AsnAdd BLAST16
Compositional biasi45 – 55Poly-AsnAdd BLAST11
Compositional biasi550 – 554Poly-Lys5
Compositional biasi749 – 752Poly-Leu4

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG502RHRS, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_325022_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q54TP6

Identification of Orthologs from Complete Genome Data

More...OMAi		NDTHETI

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q54TP6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDDESDNNN NNNNNNNNNN NNNIGCKILK TVISGRRSIL LESYNNNNKN 
        60         70         80         90        100
KNNNNIIIKS YEDEFNLFKL NNKKELSIEK LQTIAKDNGL PFDENENDLY 
       110        120        130        140        150
NRIEIYYNIK IKLEKEVKQQ HDNNPFNKGH PILLINNDNK NEILFWKVFR 
       160        170        180        190        200
NKLIFKNIFS NFKYSNLFNY SRLFSVYNIY NDFNNCIEII RDKVKSNSYL 
       210        220        230        240        250
AFGHCLDNFS GLSTILKNIK KDTQENQLFH NRLLNNYCNK LIHAGNFFKI 
       260        270        280        290        300
IIESFNLLAL KSFFNNKTLK IKKVKINFEI NKISELKFLE YLFNNHKEYI 
       310        320        330        340        350
EIQKIIITIL KPNIFEKFKL GELIKLVMIL YDDEIYTKIE KLDNLKNKLI 
       360        370        380        390        400
YNKIKEFQFS DKELNENLLT LLKPVTKSDR FYIKLNDNYN NKLNIIFKYI 
       410        420        430        440        450
NIFYKLVGGS TIKPFEYYFT HMGEKELIEN KPNEINQRQT KMVINSNIKR 
       460        470        480        490        500
ILLKNNNDTH ETINSIKSID MLDSLFNNYQ DQFFKDRNEN WKYVNSITIL 
       510        520        530        540        550
KHYEKLMLSL GRKFSFNNSN VIEIGSKGIQ SKLYLIAINN PSLYQVIGEK 
       560        570        580        590        600
KKKKDYVLNL NFIAFPGKLT FISLIESNYF KNIKISESLE FTKYITISRW 
       610        620        630        640        650
ISDNCISIFS DNNKPEIYIQ LPNLKKINIV SGISSGSGIS SGSGGNDGKI 
       660        670        680        690        700
KIILDQLQLV QILYNSNRID DIFKIKNLDS NIITSFIKNI SPHISLDFVN 
       710        720        730        740        750
RLIIRGYFNN YQKKNNFLNQ IVLNNNLPII KFLYLNHSSC FFYYNLKDLL 
       760        770        780        790        800
LLAISNDNYQ IAELFFVFCN FTRKELKSVI KTKFSLIELI HGNKLKLGIE 

IIKK
Length:804
Mass (Da):94,686
Last modified:April 5, 2011 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1DA77A14C7ABC0CC
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence EAL66662 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AAFI02000042 Genomic DNA Translation: EAL66577.1
AAFI02000042 Genomic DNA Translation: EAL66662.1 Sequence problems.

NCBI Reference Sequences

More...RefSeqi		XP_640544.1, XM_635452.1
XP_640545.1, XM_635453.1

Genome annotation databases

Ensembl protists genome annotation project

More...EnsemblProtistsi		EAL66577; EAL66577; DDB_G0281631
EAL66662; EAL66662; DDB_G0281801

Database of genes from NCBI RefSeq genomes

More...GeneIDi		8623154
8623155

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ddi:DDB_G0281631
ddi:DDB_G0281801

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000042 Genomic DNA Translation: EAL66577.1
AAFI02000042 Genomic DNA Translation: EAL66662.1 Sequence problems.
RefSeqiXP_640544.1, XM_635452.1
XP_640545.1, XM_635453.1

3D structure databases

SMRiQ54TP6
ModBaseiSearch...

Proteomic databases

PaxDbiQ54TP6

Genome annotation databases

EnsemblProtistsiEAL66577; EAL66577; DDB_G0281631
EAL66662; EAL66662; DDB_G0281801
GeneIDi8623154
8623155
KEGGiddi:DDB_G0281631
ddi:DDB_G0281801

Phylogenomic databases

eggNOGiENOG502RHRS, Eukaryota
HOGENOMiCLU_325022_0_0_1
InParanoidiQ54TP6
OMAiNDTHETI

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiY8322_DICDI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q54TP6
Secondary accession number(s): Q54TP7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: April 5, 2011
Last modified: December 2, 2020
This is version 48 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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