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UniProtKB - Q54T60 (TMM50_DICDI)
Protein
Transmembrane protein 50 homolog
Gene
tmem50
Organism
Dictyostelium discoideum (Slime mold)
Status
Functioni
GO - Biological processi
- late endosome to vacuole transport via multivesicular body sorting pathway Source: GO_Central
Names & Taxonomyi
Protein namesi | Recommended name: Transmembrane protein 50 homolog |
Gene namesi | Name:tmem50 ORF Names:DDB_G0281983 |
Organismi | Dictyostelium discoideum (Slime mold) |
Taxonomic identifieri | 44689 [NCBI] |
Taxonomic lineagei | Eukaryota › Amoebozoa › Evosea › Eumycetozoa › Dictyostelia › Dictyosteliales › Dictyosteliaceae › Dictyostelium |
Proteomesi |
|
Organism-specific databases
dictyBasei | DDB_G0281983, tmem50 |
Subcellular locationi
Other locations
- Membrane Curated; Multi-pass membrane protein Curated
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 5 – 25 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 45 – 65 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 87 – 107 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 124 – 144 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000328501 | 1 – 156 | Transmembrane protein 50 homologAdd BLAST | 156 |
Proteomic databases
PaxDbi | Q54T60 |
Structurei
Family & Domainsi
Sequence similaritiesi
Belongs to the UPF0220 family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG3393, Eukaryota |
HOGENOMi | CLU_156199_0_0_1 |
InParanoidi | Q54T60 |
OMAi | MEDDYTY |
PhylomeDBi | Q54T60 |
Family and domain databases
InterProi | View protein in InterPro IPR007919, UPF0220 |
PANTHERi | PTHR13180, PTHR13180, 1 hit |
Pfami | View protein in Pfam PF05255, UPF0220, 1 hit |
i Sequence
Sequence statusi: Complete.
Q54T60-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRKTIMKYLP ALAGIIFTAG WFLWIDGHVY ENTNNKNADF DGPHIQWIYY
60 70 80 90 100
LPGIFATLGM VMANIVDLSA LNSNSLLFDG GATKVRVWLF ISFAISFGCI
110 120 130 140 150
GAALWIMVAV FLPPHNTNDA AQWPGIAITL QTSLIFLSSL LLVFKKVRQD
DEYDQF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAFI02000044 Genomic DNA Translation: EAL66413.1 |
RefSeqi | XP_640391.1, XM_635299.1 |
Genome annotation databases
EnsemblProtistsi | EAL66413; EAL66413; DDB_G0281983 |
GeneIDi | 8623346 |
KEGGi | ddi:DDB_G0281983 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAFI02000044 Genomic DNA Translation: EAL66413.1 |
RefSeqi | XP_640391.1, XM_635299.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 44689.DDB0233326 |
Proteomic databases
PaxDbi | Q54T60 |
Genome annotation databases
EnsemblProtistsi | EAL66413; EAL66413; DDB_G0281983 |
GeneIDi | 8623346 |
KEGGi | ddi:DDB_G0281983 |
Organism-specific databases
dictyBasei | DDB_G0281983, tmem50 |
Phylogenomic databases
eggNOGi | KOG3393, Eukaryota |
HOGENOMi | CLU_156199_0_0_1 |
InParanoidi | Q54T60 |
OMAi | MEDDYTY |
PhylomeDBi | Q54T60 |
Miscellaneous databases
PROi | PR:Q54T60 |
Family and domain databases
InterProi | View protein in InterPro IPR007919, UPF0220 |
PANTHERi | PTHR13180, PTHR13180, 1 hit |
Pfami | View protein in Pfam PF05255, UPF0220, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | TMM50_DICDI | |
Accessioni | Q54T60Primary (citable) accession number: Q54T60 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 8, 2008 |
Last sequence update: | May 24, 2005 | |
Last modified: | February 23, 2022 | |
This is version 70 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Uncharacterized protein families (UPF)
List of uncharacterized protein family (UPF) entries - Dictyostelium discoideum
Dictyostelium discoideum: entries, gene names and cross-references to dictyBase - SIMILARITY comments
Index of protein domains and families