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Protein

Myb-like protein L

Gene

mybL

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi567 – 591H-T-H motifPROSITE-ProRule annotationAdd BLAST25
DNA bindingi675 – 698H-T-H motifPROSITE-ProRule annotationAdd BLAST24
DNA bindingi727 – 750H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Myb-like protein L
Gene namesi
Name:mybL
ORF Names:DDB_G0285373
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyostelidsDictyostelialesDictyosteliaceaeDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 4, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0285373 mybL

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003293871 – 855Myb-like protein LAdd BLAST855

Proteomic databases

PaxDbiQ54NA6
PRIDEiQ54NA6

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi44689.DDB0220511

Structurei

3D structure databases

ProteinModelPortaliQ54NA6
SMRiQ54NA6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini539 – 595HTH myb-type 1PROSITE-ProRule annotationAdd BLAST57
Domaini596 – 646Myb-likeAdd BLAST51
Domaini647 – 702HTH myb-type 2PROSITE-ProRule annotationAdd BLAST56
Domaini703 – 754HTH myb-type 3PROSITE-ProRule annotationAdd BLAST52

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili291 – 324Sequence analysisAdd BLAST34

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi3 – 72Asn-richAdd BLAST70
Compositional biasi173 – 279Asn-richAdd BLAST107
Compositional biasi186 – 241Thr-richAdd BLAST56
Compositional biasi355 – 362Poly-Gly8
Compositional biasi483 – 499Asn-richAdd BLAST17
Compositional biasi804 – 815Poly-ThrAdd BLAST12

Keywords - Domaini

Coiled coil, Repeat

Phylogenomic databases

eggNOGiKOG0049 Eukaryota
ENOG4111SAB LUCA
InParanoidiQ54NA6
OMAiRERYCNV

Family and domain databases

CDDicd00167 SANT, 3 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017877 Myb-like_dom
IPR017930 Myb_dom
IPR001005 SANT/Myb
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 2 hits
SMARTiView protein in SMART
SM00717 SANT, 5 hits
SUPFAMiSSF46689 SSF46689, 4 hits
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 3 hits

Sequencei

Sequence statusi: Complete.

Q54NA6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSNANGNSNG KQNNDLEDLQ SLNLLLSNSN NNNNNNNNNN NNNNNNNNNN
60 70 80 90 100
NNNNNKNNNN NNSNISSNGN INYTESQTFK EHPIGLPKPV QEFVTKLMTH
110 120 130 140 150
RNNLIETNAI DKPFLIPPSK EVVDLFKTYK KSMNDANGIQ DEDQDDTDDE
160 170 180 190 200
FALLPDDHYD EELILDEDYQ DGNDENDTNN SNNANTTTRN NTTTAIQNNA
210 220 230 240 250
LTIPNSSSSS SYNLIEAIGN LNNNNTLGTT TTTTTTTTTT TSLPDLNLNF
260 270 280 290 300
DSSELFKKFK NDNHQNHDSN INNNNKILND GLDVTNLLKI NKEYQEFIKK
310 320 330 340 350
YLQKIEEEQK RNKEMLAQAR KSIHVTIGPR TIKGGGFRKK GIAKEQLDNS
360 370 380 390 400
DSDNGGGGNG GGFDDEYVNC SCIGTCICID SNGQPLFKRK KPGIPYFSFE
410 420 430 440 450
VEVDGVIQTH YPADNPDSEN IRITKNNMPL YFKTRRWTKK ESELLLKGIK
460 470 480 490 500
EKNLQKKLYR LSEDKLSKAE YEKKLKQIQR SSNNNNNNNN NINNNNNNNS
510 520 530 540 550
IKDKQDFVAP TMQVISQVCV ESLTRSPLEA YLRWKNHDDP SINKGPFTKE
560 570 580 590 600
EDKKLLTLAK KYDGHEWEKI SIELGTNRTP LACIQRYQRS LNSKMMKREW
610 620 630 640 650
TKEEDEVLAG VIKLHMHGER IDWQEITEYI PGRTGHQCLH RWHKTLDPSI
660 670 680 690 700
KKGRWSPEED QCLINAVNAY GKGNWILIKN HVKGRTDVQC RERYCNVLDP
710 720 730 740 750
QLTKIRWTPQ EDKRLFDITN KVGIGKWSDV AKLMENRTDN QCWRRWKQLN
760 770 780 790 800
KSSNVLKDYQ EKVSKKKEIC VSNFSGRKHE RSELTVDDVI EIEEKLNPKS
810 820 830 840 850
NKKTKTLTST TTTSTNPTTN NNKTDNIDNQ CGKNNDCSTF CGIDDHYDDE

LLQKD
Length:855
Mass (Da):97,860
Last modified:May 24, 2005 - v1
Checksum:i7F5AC498220030BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000079 Genomic DNA Translation: EAL64761.1
RefSeqiXP_638274.1, XM_633182.1

Genome annotation databases

EnsemblProtistsiEAL64761; EAL64761; DDB_G0285373
GeneIDi8625082
KEGGiddi:DDB_G0285373

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000079 Genomic DNA Translation: EAL64761.1
RefSeqiXP_638274.1, XM_633182.1

3D structure databases

ProteinModelPortaliQ54NA6
SMRiQ54NA6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0220511

Proteomic databases

PaxDbiQ54NA6
PRIDEiQ54NA6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAL64761; EAL64761; DDB_G0285373
GeneIDi8625082
KEGGiddi:DDB_G0285373

Organism-specific databases

dictyBaseiDDB_G0285373 mybL

Phylogenomic databases

eggNOGiKOG0049 Eukaryota
ENOG4111SAB LUCA
InParanoidiQ54NA6
OMAiRERYCNV

Miscellaneous databases

PROiPR:Q54NA6

Family and domain databases

CDDicd00167 SANT, 3 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017877 Myb-like_dom
IPR017930 Myb_dom
IPR001005 SANT/Myb
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 2 hits
SMARTiView protein in SMART
SM00717 SANT, 5 hits
SUPFAMiSSF46689 SSF46689, 4 hits
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiMYBL_DICDI
AccessioniPrimary (citable) accession number: Q54NA6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 24, 2005
Last modified: October 10, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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Main funding by: National Institutes of Health

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