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UniProtKB - Q54FD2 (PKS38_DICDI)

Entry version 104 (23 Feb 2022)
Sequence version 1 (24 May 2005)
Previous versions | rss
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Protein

Probable polyketide synthase 38

Gene

pks38

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probable polyketide synthase.

By similarity

Miscellaneous

Encoded by one of the numerous copies of polyketide synthase genes and clustered as a pair pks38/pks39 in chromosome 5.

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

pantetheine 4'-phosphateBy similarityNote: Binds 1 phosphopantetheine covalently.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei181For beta-ketoacyl synthase activityPROSITE-ProRule annotation1
Active sitei657For acyl/malonyl transferase activityPROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferase

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Probable polyketide synthase 38 (EC:2.3.1.-)
Short name:
dipks38
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pks38
ORF Names:DDB_G0290937
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDictyostelium discoideum (Slime mold)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri44689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Amoebozoa › Evosea › Eumycetozoa › Dictyostelia › Dictyosteliales › Dictyosteliaceae › Dictyostelium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002195 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Dictyostelium discoideum online informatics resource

More...dictyBasei		DDB_G0290937, pks38

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003713951 – 3133Probable polyketide synthase 38Add BLAST3133

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2599O-(pantetheine 4'-phosphoryl)serinePROSITE-ProRule annotation1

Keywords - PTMi

Phosphopantetheine, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q54FD2

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		44689.DDB0235304

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q54FD2

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2562 – 2639CarrierPROSITE-ProRule annotationAdd BLAST78

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni162 – 215Beta-ketoacyl synthaseAdd BLAST54
Regioni647 – 680Acyl/malonyl transferaseAdd BLAST34
Regioni1370 – 1408DisorderedSequence analysisAdd BLAST39
Regioni2691 – 2715DisorderedSequence analysisAdd BLAST25
Regioni2794 – 2817DisorderedSequence analysisAdd BLAST24

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili2649 – 2711Sequence analysisAdd BLAST63

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Modular protein that is responsible for the completion of one condensation-processing cycle. The beta-ketoacyl synthase region is responsible for the actual condensation reaction while the acyl/malonyl transferase region is responsible for incorporating carboxylic acids units onto an acyl carrier protein (ACP) domain (By similarity).By similarity

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG1178, Eukaryota
KOG1202, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_000022_31_5_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q54FD2

Identification of Orthologs from Complete Genome Data

More...OMAi		CINSPLN

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q54FD2

Family and domain databases

Conserved Domains Database

More...CDDi		cd05235, SDR_e1, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.10.1200.10, 1 hit
3.10.129.110, 1 hit
3.40.366.10, 1 hit
3.40.47.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR001227, Ac_transferase_dom_sf
IPR036736, ACP-like_sf
IPR014043, Acyl_transferase
IPR016035, Acyl_Trfase/lysoPLipase
IPR013120, Far_NAD-bd
IPR011032, GroES-like_sf
IPR018201, Ketoacyl_synth_AS
IPR014031, Ketoacyl_synth_C
IPR014030, Ketoacyl_synth_N
IPR016036, Malonyl_transacylase_ACP-bd
IPR013217, Methyltransf_12
IPR036291, NAD(P)-bd_dom_sf
IPR020841, PKS_Beta-ketoAc_synthase_dom
IPR020807, PKS_dehydratase
IPR042104, PKS_dehydratase_sf
IPR020843, PKS_ER
IPR013968, PKS_KR
IPR009081, PP-bd_ACP
IPR029063, SAM-dependent_MTases
IPR010080, Thioester_reductase-like_dom
IPR016039, Thiolase-like

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00698, Acyl_transf_1, 1 hit
PF00109, ketoacyl-synt, 1 hit
PF02801, Ketoacyl-synt_C, 1 hit
PF08659, KR, 1 hit
PF08242, Methyltransf_12, 1 hit
PF07993, NAD_binding_4, 1 hit
PF14765, PS-DH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00827, PKS_AT, 1 hit
SM00829, PKS_ER, 1 hit
SM00825, PKS_KS, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF47336, SSF47336, 1 hit
SSF50129, SSF50129, 1 hit
SSF51735, SSF51735, 3 hits
SSF52151, SSF52151, 1 hit
SSF53335, SSF53335, 1 hit
SSF53901, SSF53901, 1 hit
SSF55048, SSF55048, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00606, B_KETOACYL_SYNTHASE, 1 hit
PS50075, CARRIER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q54FD2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTENIDKNDD DVAVIGIGLR FPSGNLKESI SKPNQLFNEL LNGLDGIVTT 
        60         70         80         90        100
SERWSDNYYL NGEVVSKFAG LLPLDEWKQF DPIFFAINPS YDNVSSIDPQ 
       110        120        130        140        150
QRLLLKCVWE ALEDSGIDPI SLRGTNTSTF IGSSTIDYND LQKSPFETQN 
       160        170        180        190        200
NIFGSTTHSI ANRIGFSFDF RGENLTIDTA CSSSSNAINC GYNSIKSNKS 
       210        220        230        240        250
NVSIVGGVNF ILNPYISKSF TQLDMLSPTG KCHTFSSDAD GFVRSEGVGI 
       260        270        280        290        300
VVLKKLKDAI KDSNNIYCVI KGSSSNIDGN FDKLNFYSPS KLSQFENIKL 
       310        320        330        340        350
AIKSTNGQIN ESDIDYCETH GTGTPTGDPI ELEGISRAFN NKASTTNNNK 
       360        370        380        390        400
QVLVGSFKSN IGHTEACSGV ASLIKCCLMF KNKLFLQNIN FKEPNPLINF 
       410        420        430        440        450
KEWGLKVVTE PIKFNENKPT VMLINNFGIT GSNVCLILSE FSGYQFGYSK 
       460        470        480        490        500
SNDYQKMEID NKFNEKKKYL IPLSSNSSTS LDNYKLSIIK HLNSRSSSSS 
       510        520        530        540        550
TTTSFEEFVY NQIKFKSTSL IQKSVIIASD WNEFQDENNQ IKLENSDNLI 
       560        570        580        590        600
SNITVEKKKS PIIVMVLCGQ GSQYNKMALS LYDNEPIFRE SVNRFDKELF 
       610        620        630        640        650
KYYGYSVLDK LRSIDDKDLI SIHQSILAQP ATVIIQVSLY ELYKHRGVSA 
       660        670        680        690        700
DIIIGHSLGE ISSAYCSGMI DFQTLCYLTY HRSVAQNRTS GTGKMLSVNI 
       710        720        730        740        750
SSDEFINSYQ STTKYESLEI ACYNSPTSIV IAGKEDLLNE ITKDFKTNDI 
       760        770        780        790        800
FCAMLGSLSS FHTSSQQMIK DEVCSLNISS KQSSIAIFST VTTNLFNDET 
       810        820        830        840        850
SPFDADYVFD NIRQPVRFTQ TITNLYKYFE SNDMGNEITF IEVSPHPTLQ 
       860        870        880        890        900
FYLNQMKSTQ SSYFNSGKNI TIYSPLNKKK NDYNEFLKTI SLLYVNNNLN 
       910        920        930        940        950
INFKSQLIDN NNNYTNQFNN LPLYQWDDKE YFKISWFQEK IKNEGPSIHS 
       960        970        980        990       1000
LGNNTDSPYP SYQTFIDIKK SPFQWLKGHQ VSDKFYYPGM GYVHNLLSIY 
      1010       1020       1030       1040       1050
PNQDITISSL EFKSPLILTE GNRQCLQTTI APLSKNEFNI KSHYKDQKTN 
      1060       1070       1080       1090       1100
QWILTSLGNF SLSKHNIENN EPINIRALKD KCNFTCISKQ DLYETVRIKT 
      1110       1120       1130       1140       1150
NLTYKGLFQG VKQCYIGNNC SLAIVSLNEI YNQKEYNHLI NNSNMNTLFN 
      1160       1170       1180       1190       1200
TAILDTCLHG VLGVVTQPVV LDRIEGFKFY SSNTPSFNNN STNSNNDTIN 
      1210       1220       1230       1240       1250
ELYVYSENKA RINSKTYSGS IKIILPNGTL LIDIGNVVCT IVASNPDSTI 
      1260       1270       1280       1290       1300
ICEPPSNKIY TPYLQSKDSV IKNPEQFKHL YRVDEFSFKN EENQFISIGL 
      1310       1320       1330       1340       1350
LLSLFYKHIN NRCPSINLES LETLEYDQFK QLYYNSSRNE NLFKFIFENL 
      1360       1370       1380       1390       1400
KNYQNIMYSN SFNKTILFNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
      1410       1420       1430       1440       1450
NNDNDNDNNC YNYENFYIRT TKIMAKQLFP LKDDDSITDT PQSLFESGYL 
      1460       1470       1480       1490       1500
DYHYKNSKIV QPLNNLLGEI IVETLKPILN EPIVFRILEA GGGTGSLSLL 
      1510       1520       1530       1540       1550
ILEKICKLLN ENNSTSIIDI EFTWSDISAS FFAEIKEKFS SFTNHNSLNI 
      1560       1570       1580       1590       1600
IYRVLDLEKP LLDQDLKASY YDFVVMSNVM HVVKKLKPTL NEIHNILAPN 
      1610       1620       1630       1640       1650
GQLLFVEPPY KSFFIDSIFG CFSQWWPSSD SDIELRPDRC CMEQEKWISL 
      1660       1670       1680       1690       1700
LNQCTYRDTV LYGNDKLLFL IQTRKPTINE IISEQSISLD QLNSFNNIIL 
      1710       1720       1730       1740       1750
FSSNNNNDNN NNSNNYYNNR NSYSSSSIQN LIRLNQELKH KIININNYNE 
      1760       1770       1780       1790       1800
FQSWITNNQN KDNCGNKTLI IFLKSIESIM NTSNFKEITF EYIQINQLIL 
      1810       1820       1830       1840       1850
KLELSNSFKH LLLSLNSTTD NYLSSSIVGA ARYFVEFPQL DLYILNYDNI 
      1860       1870       1880       1890       1900
SIENNQQLLS LINYLIDSNN NIQKEFTIIN NKVYYERYCR RSNNIKSKLQ 
      1910       1920       1930       1940       1950
SKSFETNKDN LFIQLNSNLE YQLYSKKDEL NSNEVEIEIK ATSINYKDYL 
      1960       1970       1980       1990       2000
MYIGMIGTDI DIKYGKEYEI ENGIGIDNPK IGNDFSGIIT RLGCNVKDFK 
      2010       2020       2030       2040       2050
VGDQVCGVGS KTNSSHIIVD YNYIYYKPLN YSYSVSASIP SVYITSLHSI 
      2060       2070       2080       2090       2100
YNIGNLKSNE SILIHSAAGG IGISSLDLLK SKQHQGYIFL TVGSKDKEEY 
      2110       2120       2130       2140       2150
LIKKYGSLIT AIYSSRNKNY VKDIKNKLIE LGEVEQHQQQ GVDLILNTLS 
      2160       2170       2180       2190       2200
SEFMDSNFQC LNLSGRIVDL SITHLTPNDY MTNNHYKFNV GYFNVEVIDF 
      2210       2220       2230       2240       2250
PGKLIKSYIK KIIKMINSNK LEPSVPIIEY SNNQFKDAIE YINQRKHIGK 
      2260       2270       2280       2290       2300
IIVNHNQDEF NRIYNIYQNN NNQIMKHSYD ISKLNIGKNI LLTGQTGIVL 
      2310       2320       2330       2340       2350
EILKYLVKYS NHSIENIIIL SKSKLKWELE LLINQTKFKK DNIIKFHFNQ 
      2360       2370       2380       2390       2400
IDIEDSTKVN QVLNQLELNE NITNIDSIIH FAFMNDICDV QKVDMNRLNI 
      2410       2420       2430       2440       2450
THGAKTIGAI NLHNQSINRS WNIKQFIMAS SVVSIFGSDK QCCYVSACNV 
      2460       2470       2480       2490       2500
IDSLSKYRHS IGLPSLAINL GAISSTGFVS RNNAIETMLK STLSNLFSPQ 
      2510       2520       2530       2540       2550
LVISSLDLFI QNQHQYPNYC LSDFNFEVLP STLTNQHHSK FDFEINIVKK 
      2560       2570       2580       2590       2600
SNQIKSFSGD DNNNEIIRST ILNKISEILS IDESKINEDL QLSQYGMDSL 
      2610       2620       2630       2640       2650
VIVQLKNFVD NQLGHNIITI QQLQNNKINQ SIEIIKSAHN KNKNNNNNNN 
      2660       2670       2680       2690       2700
NNSNHHDNIK KEQQSLDEFI KNETKLNESI ISRPYSIKNI LNNNNNNNNN 
      2710       2720       2730       2740       2750
NNNNNNNNNN NNNNNNNNNC QSIFLTGSTG FLGAYLLIEL IKVNNISKIY 
      2760       2770       2780       2790       2800
CLIRNNSKLT NPIDVIINNL KKHQLIDMNK ESPKRKTKII NHTGNISNDK 
      2810       2820       2830       2840       2850
LNSSNSNSDN SNNNNNQINE DQLIKIIPII GDISKDKFGL TEQDYLKLSN 
      2860       2870       2880       2890       2900
ECDIIINSAA DINLKSNYEE SKTVNVNSVN QIIKLSVSNN SSQKLIVHFS 
      2910       2920       2930       2940       2950
SLAVFINHPF KDEEDFEETN SVPSFNSTPI GYIQSKVISE KLITNAAESR 
      2960       2970       2980       2990       3000
GIPSIIIRPP DIFSNPITGI GHSNDFISLL IKASKEIGYY PNIHKSIFST 
      3010       3020       3030       3040       3050
PVTTIAKTTI DLIFNENSWN QNKSKPISIY NFNGNSMEMK SFYRVLENNF 
      3060       3070       3080       3090       3100
KCKEIDFDEW IELVSKSNGK SSKRYSTFHI HKNQNLLLTT FTINSLLKMS 
      3110       3120       3130 
NSTKELLTSI GSYNHQDWEI NESMILNDII NNH
Length:3,133
Mass (Da):357,196
Last modified:May 24, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAD86A31ED1B71E31
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AAFI02000172 Genomic DNA Translation: EAL61984.1

NCBI Reference Sequences

More...RefSeqi		XP_635490.1, XM_630398.1

Genome annotation databases

Ensembl protists genome annotation project

More...EnsemblProtistsi		EAL61984; EAL61984; DDB_G0290937

Database of genes from NCBI RefSeq genomes

More...GeneIDi		8627906

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ddi:DDB_G0290937

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000172 Genomic DNA Translation: EAL61984.1
RefSeqiXP_635490.1, XM_630398.1

3D structure databases

SMRiQ54FD2
ModBaseiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0235304

Proteomic databases

PaxDbiQ54FD2

Genome annotation databases

EnsemblProtistsiEAL61984; EAL61984; DDB_G0290937
GeneIDi8627906
KEGGiddi:DDB_G0290937

Organism-specific databases

dictyBaseiDDB_G0290937, pks38

Phylogenomic databases

eggNOGiKOG1178, Eukaryota
KOG1202, Eukaryota
HOGENOMiCLU_000022_31_5_1
InParanoidiQ54FD2
OMAiCINSPLN
PhylomeDBiQ54FD2

Miscellaneous databases

Protein Ontology

More...PROi		PR:Q54FD2

Family and domain databases

CDDicd05235, SDR_e1, 1 hit
Gene3Di1.10.1200.10, 1 hit
3.10.129.110, 1 hit
3.40.366.10, 1 hit
3.40.47.10, 1 hit
InterProiView protein in InterPro
IPR001227, Ac_transferase_dom_sf
IPR036736, ACP-like_sf
IPR014043, Acyl_transferase
IPR016035, Acyl_Trfase/lysoPLipase
IPR013120, Far_NAD-bd
IPR011032, GroES-like_sf
IPR018201, Ketoacyl_synth_AS
IPR014031, Ketoacyl_synth_C
IPR014030, Ketoacyl_synth_N
IPR016036, Malonyl_transacylase_ACP-bd
IPR013217, Methyltransf_12
IPR036291, NAD(P)-bd_dom_sf
IPR020841, PKS_Beta-ketoAc_synthase_dom
IPR020807, PKS_dehydratase
IPR042104, PKS_dehydratase_sf
IPR020843, PKS_ER
IPR013968, PKS_KR
IPR009081, PP-bd_ACP
IPR029063, SAM-dependent_MTases
IPR010080, Thioester_reductase-like_dom
IPR016039, Thiolase-like
PfamiView protein in Pfam
PF00698, Acyl_transf_1, 1 hit
PF00109, ketoacyl-synt, 1 hit
PF02801, Ketoacyl-synt_C, 1 hit
PF08659, KR, 1 hit
PF08242, Methyltransf_12, 1 hit
PF07993, NAD_binding_4, 1 hit
PF14765, PS-DH, 1 hit
SMARTiView protein in SMART
SM00827, PKS_AT, 1 hit
SM00829, PKS_ER, 1 hit
SM00825, PKS_KS, 1 hit
SUPFAMiSSF47336, SSF47336, 1 hit
SSF50129, SSF50129, 1 hit
SSF51735, SSF51735, 3 hits
SSF52151, SSF52151, 1 hit
SSF53335, SSF53335, 1 hit
SSF53901, SSF53901, 1 hit
SSF55048, SSF55048, 1 hit
PROSITEiView protein in PROSITE
PS00606, B_KETOACYL_SYNTHASE, 1 hit
PS50075, CARRIER, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPKS38_DICDI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q54FD2
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: May 24, 2005
Last modified: February 23, 2022
This is version 104 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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