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Entry version 106 (23 Feb 2022)
Sequence version 1 (24 May 2005)
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Protein

Probable polyketide synthase 39

Gene

pks39

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probable polyketide synthase.

By similarity

Miscellaneous

Encoded by one of the numerous copies of polyketide synthase genes and clustered as a pair pks38/pks39 in chromosome 5.

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

pantetheine 4'-phosphateBy similarityNote: Binds 1 phosphopantetheine covalently.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei181For beta-ketoacyl synthase activityPROSITE-ProRule annotation1
Active sitei653For acyl/malonyl transferase activityPROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferase

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Probable polyketide synthase 39 (EC:2.3.1.-)
Short name:
dipks39
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pks39
ORF Names:DDB_G0290943
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDictyostelium discoideum (Slime mold)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri44689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaAmoebozoaEvoseaEumycetozoaDictyosteliaDictyostelialesDictyosteliaceaeDictyostelium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002195 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Dictyostelium discoideum online informatics resource

More...
dictyBasei
DDB_G0290943, pks39

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei2702 – 2722HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003713961 – 3108Probable polyketide synthase 39Add BLAST3108

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2603O-(pantetheine 4'-phosphoryl)serinePROSITE-ProRule annotation1

Keywords - PTMi

Phosphopantetheine, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q54FC8

PRoteomics IDEntifications database

More...
PRIDEi
Q54FC8

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
44689.DDB0237714

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q54FC8

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2566 – 2643CarrierPROSITE-ProRule annotationAdd BLAST78

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni162 – 215Beta-ketoacyl synthaseAdd BLAST54
Regioni643 – 676Acyl/malonyl transferaseAdd BLAST34
Regioni1375 – 1435DisorderedSequence analysisAdd BLAST61

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Modular protein that is responsible for the completion of one condensation-processing cycle. The beta-ketoacyl synthase region is responsible for the actual condensation reaction while the acyl/malonyl transferase region is responsible for incorporating carboxylic acids units onto an acyl carrier protein (ACP) domain (By similarity).By similarity

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1178, Eukaryota
KOG1202, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000022_31_5_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q54FC8

Identification of Orthologs from Complete Genome Data

More...
OMAi
WYLHEAT

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q54FC8

Family and domain databases

Conserved Domains Database

More...
CDDi
cd05235, SDR_e1, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.1200.10, 1 hit
3.10.129.110, 1 hit
3.40.366.10, 1 hit
3.40.47.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001227, Ac_transferase_dom_sf
IPR036736, ACP-like_sf
IPR014043, Acyl_transferase
IPR016035, Acyl_Trfase/lysoPLipase
IPR013120, Far_NAD-bd
IPR011032, GroES-like_sf
IPR018201, Ketoacyl_synth_AS
IPR014031, Ketoacyl_synth_C
IPR014030, Ketoacyl_synth_N
IPR016036, Malonyl_transacylase_ACP-bd
IPR013217, Methyltransf_12
IPR036291, NAD(P)-bd_dom_sf
IPR020841, PKS_Beta-ketoAc_synthase_dom
IPR020807, PKS_dehydratase
IPR042104, PKS_dehydratase_sf
IPR020843, PKS_ER
IPR013968, PKS_KR
IPR009081, PP-bd_ACP
IPR029063, SAM-dependent_MTases
IPR010080, Thioester_reductase-like_dom
IPR016039, Thiolase-like

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00698, Acyl_transf_1, 1 hit
PF00109, ketoacyl-synt, 1 hit
PF02801, Ketoacyl-synt_C, 1 hit
PF08659, KR, 1 hit
PF08242, Methyltransf_12, 1 hit
PF07993, NAD_binding_4, 1 hit
PF14765, PS-DH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00827, PKS_AT, 1 hit
SM00829, PKS_ER, 1 hit
SM00825, PKS_KS, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47336, SSF47336, 1 hit
SSF50129, SSF50129, 1 hit
SSF51735, SSF51735, 3 hits
SSF52151, SSF52151, 1 hit
SSF53335, SSF53335, 1 hit
SSF53901, SSF53901, 1 hit
SSF55048, SSF55048, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00606, B_KETOACYL_SYNTHASE, 1 hit
PS50075, CARRIER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q54FC8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTENIDKNDD DVAVIGIGLR FPSGNLKESI SKPNQLFNEL LNGLDGIVTT
60 70 80 90 100
SERWSDNYYL NGEVVSKFAG LLPLDEWKQF DPIFFAINPS YDNVSSIDPQ
110 120 130 140 150
QRLLLKCVWE ALEDSGIDPI SLRGTNTSTF IGSSTIDYND LQKSPFETQN
160 170 180 190 200
NIFGSTTHSI ANRIGFSFDF RGENLTIDTA CSSSSNAINC GYNSIKSNKS
210 220 230 240 250
NVSIVGGVNF ILNPYISKSF TQLDMLSPTG KCHTFSSDAD GFVRSEGVGI
260 270 280 290 300
VVLKKLKDAI KDSNNIYCVI KGSSSNIDGN FDKLNFYSPS KLSQCENIKL
310 320 330 340 350
AIKSTNGQIN ESDIDYCETH GTGTPTGDPI ELEGISRAFN NKASTTNNNK
360 370 380 390 400
QVLVGSFKSN IGHTEACSGV ASLIKCCLMF KNKLFLQNIN FKEPNPLINF
410 420 430 440 450
KEWGLKVVTE PIKFNENKPT VMLINNFGIT GSNVCLILSE FSGNSKSNDY
460 470 480 490 500
QKMEIDNKFN EKKKYLIPLS SNSSTSLNNY KLSIIKHLNS RSSSSSTTTS
510 520 530 540 550
FEEFVYNQIK FKSTSLIQKS VIIASDWNEF QDENNQIKLE NSDNLISNIT
560 570 580 590 600
VEKKKSPIIV MVLCGQGSQY NKMALSLYDN EPIFREYVNR FDKELFKYYG
610 620 630 640 650
YSVLDKLRSI EDKDLISIHQ PILAQPATVI IQVSLYELYK HWGVSADIII
660 670 680 690 700
GHSLGEISSA YCSGMIDFQT LCYLTYHRSV AQNRTTGTGK MLSVNISSDE
710 720 730 740 750
FINSYQSTTK YESLEIACYN SPTSIVIAGK EDLLNEIIKD FKSNDIFCAM
760 770 780 790 800
LGSLSSFHTS SQQMIKDEVC SLNISSKQPS IAIFSTVTTN LFNHQSSPFD
810 820 830 840 850
ADYVFDNIRQ PVRFTQTITN LYKYAESNDM GNEITFIEVS PHPTLQFYLN
860 870 880 890 900
QMNSTQSSYF NSGKNITIYS PLNKKKNDYN EFLKTISLLY VNNNLNINFK
910 920 930 940 950
SQLINNNNNN NNNNYTNLFN NLPLYQWDDK EYFKITSFHE KIKSEGPSIH
960 970 980 990 1000
SLGNNTDSPY PSYQTFIDIK KSPFQWLKGH QVSDKFYYPG MGHVHNLLSI
1010 1020 1030 1040 1050
YPNQDITISS LEFKSPLVLA EGNRQCLQTS VTPLSKNEFN IKSHYKDQKT
1060 1070 1080 1090 1100
NQWILTSLGN FSLFKHNIIE NNQPINIQTL KDKCNFTSIS KQDLYETIRI
1110 1120 1130 1140 1150
KTNLTYKGLF QGVKQCHIGN NCSLAIVSLN EIYIQKEYNH LINNSNMNTL
1160 1170 1180 1190 1200
FNTAILDTCL HGVLCAVTQP VVLDRIEGFN FYSSNIPSSL NYRNNNNNNN
1210 1220 1230 1240 1250
NINNNNNNNN NSNNTINEFY VYSEIRARTN FQTYSGSIKI ILPNGTLLVD
1260 1270 1280 1290 1300
IGNVVCTIAA SNPDSSLICK PNYIYTPHLQ SKDSIINKPE QFKHLHRVNE
1310 1320 1330 1340 1350
FSFKNEENLF ISNRLLLSLF YKHINNRCPS INLESLETLE YDQFKQLYYN
1360 1370 1380 1390 1400
SLVNENLFKF IFEILKKYQN IPNINNNNNN NNNNNNNNNN NNNNNNNNNN
1410 1420 1430 1440 1450
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNEKLYI KTTKIMAKQL
1460 1470 1480 1490 1500
FPLKDDDSIT DTPQSLFESG YLDVFYKNSI VVQPLNSLLS EIIVETLKPI
1510 1520 1530 1540 1550
LNEPIVFRIL EAGGGTGSLS LLILEKICKL LNENNSTTSI IDIEFTWSDI
1560 1570 1580 1590 1600
SASFFAEIKE KFSSFTNHNS LNIIYRVLDL DKPLLDQDLK ASYYDFVVMS
1610 1620 1630 1640 1650
NVMHVVKKLK PTLNEIHNIL APNGQLLFVE PPYKSFFIDS IFGCFSQWWP
1660 1670 1680 1690 1700
SSDSDIELRP DRCCMKQEKW INLLNQCNYR DTIMSGNDNL LFLVQTRKPT
1710 1720 1730 1740 1750
INEIISEQSI SLDQLKSFNN IILFSSNNKN NKNDSFSIIQ NLITLNQELK
1760 1770 1780 1790 1800
HKIININNYN EFQSWITNNQ NIDNKTLIIF LKSIDSTVNT SNFKETTFEY
1810 1820 1830 1840 1850
IQINQLILKL ELSNNFKHLL LSLNSTTDNY LTSSIVGAAR YFIEFPQLDL
1860 1870 1880 1890 1900
LTLNYDNVSI ENNQQLLSLI NYLINSNNNI QKEFTINNNI VYYERFCKRL
1910 1920 1930 1940 1950
NNIKSKFQSK SFETNKDNLY IQLNSNLEYQ LYSKKDELNS NEVEIEIKAT
1960 1970 1980 1990 2000
GINYKDYLLH IGMIGTNLEI KYGKEIENGI GFDNPKIGND FSGIITRLGC
2010 2020 2030 2040 2050
NVKEFKVGDQ VCGFGSKTNS SHIIVDSDSI YYKPLYYSHS VSASIPSIYI
2060 2070 2080 2090 2100
TSLHSIYGIG NLKSNESILI HSAAGGVGLS SLDLLKSKQH QGYIFLTVGS
2110 2120 2130 2140 2150
KDKEEYLINK YGSLITAIYS SRNKNYVYEI KNKLIELGEV EQHQQGVDLI
2160 2170 2180 2190 2200
LNTLSSEFMS PNFQCLNLSG RIVDLSITHL TPNDYMTNSH YKFNMGYNNV
2210 2220 2230 2240 2250
NVEDFPGKLI KSYLKKIIEM INSNELELSV PIIEYSNNQF KDAIEYINQR
2260 2270 2280 2290 2300
KHIGKIIVNH SQDEFNRVYN NYQNNNNQII MKHSYDISKL NIGKNIILTG
2310 2320 2330 2340 2350
QTGIVLEILK YLVKYSNHSI ENIIILSKSK LKWELELLIN QTKFKKDNII
2360 2370 2380 2390 2400
KFHFNQIDIE DSNKVNQALN QLELNENITN IDSIIHFAFM NDIGDVQQVD
2410 2420 2430 2440 2450
MNRLNNAHGA KTIGAINLHN QSINRSWNIK QFIMASSVAS IVGSEQQCCY
2460 2470 2480 2490 2500
VSACNVIDSL SKYRHSIGLP SLAINLGTIS STGFITRNNT IETMLKSSIL
2510 2520 2530 2540 2550
NFLSPQLVIS SLDLFIQNQH QYPNYCMSDF KFKIIPSTNQ YFSKFDFEIN
2560 2570 2580 2590 2600
IVKKSNQIKS FFGGDGNNEI IHSTILNKIS ELLSIDKSKI NEDLQLTQYG
2610 2620 2630 2640 2650
TDSLVIVQLK NFIDNQLGHN IITIQQLQNN KINQSIEIIK SALNKNNNIY
2660 2670 2680 2690 2700
NNKKNNNNNL VKKEQQSLDE FIKNETKLNE SIISRPYSIK KILNNNNNSK
2710 2720 2730 2740 2750
SIFLTGSTGF LGAYLLMELI KMNNISKIYC LIRNNSKLTN PIDVIINNLK
2760 2770 2780 2790 2800
KHQLIDMNKE SPKRKTKIIN HTGNISNDKL NSSDNSNNNN NQINEDQLIK
2810 2820 2830 2840 2850
IIPMIGDISK DKFGLTEQDY LKLSNECDII INSAADLNLK SNYEESKTIN
2860 2870 2880 2890 2900
VNNVNQVIKL SVSNNSSQKL IVHFSSLAVF INHPFKDEED FEETNIVPNF
2910 2920 2930 2940 2950
NSTPIGYIQS KVISEKLLTN AAESRGIPSI IIRPPDIFSN PITGIGHSND
2960 2970 2980 2990 3000
FLSLLIKASK DIGYYPNIHK SIFSTPVTTI AKTTIDLIFN ENSWNQNKSK
3010 3020 3030 3040 3050
PISIYNFNGN SMEFKSFYRV LENNFKCKEI DFDEWIELVS KSNGKSSKRY
3060 3070 3080 3090 3100
STFHIHKNQN LLLTTFTINS LFKMSNSTKE LLISIGSYNH QDWEINESMI

LNDIINNH
Length:3,108
Mass (Da):353,866
Last modified:May 24, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i73CE3B06A40C3448
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AAFI02000172 Genomic DNA Translation: EAL61987.1

NCBI Reference Sequences

More...
RefSeqi
XP_635494.1, XM_630402.1

Genome annotation databases

Ensembl protists genome annotation project

More...
EnsemblProtistsi
EAL61987; EAL61987; DDB_G0290943

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
8627910

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ddi:DDB_G0290943

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000172 Genomic DNA Translation: EAL61987.1
RefSeqiXP_635494.1, XM_630402.1

3D structure databases

SMRiQ54FC8
ModBaseiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0237714

Proteomic databases

PaxDbiQ54FC8
PRIDEiQ54FC8

Genome annotation databases

EnsemblProtistsiEAL61987; EAL61987; DDB_G0290943
GeneIDi8627910
KEGGiddi:DDB_G0290943

Organism-specific databases

dictyBaseiDDB_G0290943, pks39

Phylogenomic databases

eggNOGiKOG1178, Eukaryota
KOG1202, Eukaryota
HOGENOMiCLU_000022_31_5_1
InParanoidiQ54FC8
OMAiWYLHEAT
PhylomeDBiQ54FC8

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q54FC8

Family and domain databases

CDDicd05235, SDR_e1, 1 hit
Gene3Di1.10.1200.10, 1 hit
3.10.129.110, 1 hit
3.40.366.10, 1 hit
3.40.47.10, 1 hit
InterProiView protein in InterPro
IPR001227, Ac_transferase_dom_sf
IPR036736, ACP-like_sf
IPR014043, Acyl_transferase
IPR016035, Acyl_Trfase/lysoPLipase
IPR013120, Far_NAD-bd
IPR011032, GroES-like_sf
IPR018201, Ketoacyl_synth_AS
IPR014031, Ketoacyl_synth_C
IPR014030, Ketoacyl_synth_N
IPR016036, Malonyl_transacylase_ACP-bd
IPR013217, Methyltransf_12
IPR036291, NAD(P)-bd_dom_sf
IPR020841, PKS_Beta-ketoAc_synthase_dom
IPR020807, PKS_dehydratase
IPR042104, PKS_dehydratase_sf
IPR020843, PKS_ER
IPR013968, PKS_KR
IPR009081, PP-bd_ACP
IPR029063, SAM-dependent_MTases
IPR010080, Thioester_reductase-like_dom
IPR016039, Thiolase-like
PfamiView protein in Pfam
PF00698, Acyl_transf_1, 1 hit
PF00109, ketoacyl-synt, 1 hit
PF02801, Ketoacyl-synt_C, 1 hit
PF08659, KR, 1 hit
PF08242, Methyltransf_12, 1 hit
PF07993, NAD_binding_4, 1 hit
PF14765, PS-DH, 1 hit
SMARTiView protein in SMART
SM00827, PKS_AT, 1 hit
SM00829, PKS_ER, 1 hit
SM00825, PKS_KS, 1 hit
SUPFAMiSSF47336, SSF47336, 1 hit
SSF50129, SSF50129, 1 hit
SSF51735, SSF51735, 3 hits
SSF52151, SSF52151, 1 hit
SSF53335, SSF53335, 1 hit
SSF53901, SSF53901, 1 hit
SSF55048, SSF55048, 1 hit
PROSITEiView protein in PROSITE
PS00606, B_KETOACYL_SYNTHASE, 1 hit
PS50075, CARRIER, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPKS39_DICDI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q54FC8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: May 24, 2005
Last modified: February 23, 2022
This is version 106 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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