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UniProtKB - Q53SE7 (Q53SE7_HUMAN)

Entry version 107 (13 Feb 2019)
Sequence version 1 (24 May 2005)
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Protein
Submitted name:

Germ cell-less homolog 1 (Drosophila)

Gene

FLJ13057

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Germ cell-less homolog 1 (Drosophila)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:FLJ13057Imported
Synonyms:GMCL1Imported
ORF Names:hCG_40576Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000087338.4

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA143485477

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000087338 Expressed in 209 organ(s), highest expression level in testis

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
G2XKQ03EBI-10172181,EBI-10175576
APLFQ8IW193EBI-10172181,EBI-1256044
ApoL6B3KTP43EBI-10172181,EBI-10175904
BYSLQ138953EBI-10172181,EBI-358049
C21orf2O438223EBI-10172181,EBI-2835332
C5orf60A6NFR6-43EBI-10172181,EBI-10173955
CCDC25Q86WR03EBI-10172181,EBI-2690264
CHIC2Q9UKJ53EBI-10172181,EBI-741528
CIB3Q96Q773EBI-10172181,EBI-10292696
CLK2P497603EBI-10172181,EBI-750020
CUL3Q136183EBI-10172181,EBI-456129
ELOAQ142413EBI-10172181,EBI-742350
FAM167AQ96KS93EBI-10172181,EBI-10290462
FKBP1BP681063EBI-10172181,EBI-6693977
FOSL2P154083EBI-10172181,EBI-3893419
FOXR1Q6PIV23EBI-10172181,EBI-10253815
FRMD6Q96NE93EBI-10172181,EBI-741729
FSBPO950733EBI-10172181,EBI-1059030
GAGE1Q130653EBI-10172181,EBI-10227730
GAGE12EA1L4293EBI-10172181,EBI-10172187
GAGE12IP0CL823EBI-10172181,EBI-10196803
GAGE2DQ9UEU55EBI-10172181,EBI-751641
GAGE5Q130693EBI-10172181,EBI-745702
GLRX3O760033EBI-10172181,EBI-374781
GMCL2Q8NEA93EBI-10172181,EBI-745707
GRAMD1AQ96CP63EBI-10172181,EBI-1384139
HYKKA0A0C4DGM43EBI-10172181,EBI-10236738
IL17FQ96PD43EBI-10172181,EBI-10292310
KAT5Q929933EBI-10172181,EBI-399080
KIFC3Q9BVG83EBI-10172181,EBI-2125614
KPNA2P522923EBI-10172181,EBI-349938
MID1O153443EBI-10172181,EBI-2340316
MID2Q9UJV3-23EBI-10172181,EBI-10172526
MINDY1Q8N5J23EBI-10172181,EBI-372322
MORF4L1Q9UBU83EBI-10172181,EBI-399246
MPPE1Q53F393EBI-10172181,EBI-10242229
MTRRQ9UBK83EBI-10172181,EBI-10319161
NEBLO760413EBI-10172181,EBI-2880203
NUMA1Q149803EBI-10172181,EBI-521611
PARD6BQ9BYG53EBI-10172181,EBI-295391
PARP16Q8N5Y83EBI-10172181,EBI-10266912
PAX4Q3KNR53EBI-10172181,EBI-10240813
PBXIP1Q96AQ63EBI-10172181,EBI-740845
PTPN7P352363EBI-10172181,EBI-2265723
QRICH1Q2TAL83EBI-10172181,EBI-2798044
SHQ1Q6PI263EBI-10172181,EBI-2515568
SLC15A3Q05CH43EBI-10172181,EBI-10223741
SNX20Q7Z6143EBI-10172181,EBI-744896
STK3Q131883EBI-10172181,EBI-992580
SUMO1P631653EBI-10172181,EBI-80140
SYT17Q9BSW73EBI-10172181,EBI-745392
TRIM13O608583EBI-10172181,EBI-9867345
TRIM38O006353EBI-10172181,EBI-2130415
TRIM54Q9BYV23EBI-10172181,EBI-2130429
TSSC4Q9Y5U23EBI-10172181,EBI-717229
XAGE2Q96GT93EBI-10172181,EBI-750167
XAGE3Q8WTP93EBI-10172181,EBI-6448284
ZNF250P15622-33EBI-10172181,EBI-10177272

Protein-protein interaction databases

Protein interaction database and analysis system

More...IntActi		Q53SE7, 58 interactors

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini108 – 178BTBInterPro annotationAdd BLAST71

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4682 Eukaryota
ENOG410XPEJ LUCA

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG051741

KEGG Orthology (KO)

More...KOi		K10485

Identification of Orthologs from Complete Genome Data

More...OMAi		GAFCYCH

Database of Orthologous Groups

More...OrthoDBi		1111791at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR011705 BACK
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF07707 BACK, 1 hit
PF00651 BTB, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00875 BACK, 1 hit
SM00225 BTB, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF54695 SSF54695, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50097 BTB, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q53SE7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSLSSRVLR QPRPALAQQA QGARAGGSAR RPDTGDDAAG HGFCYCAGSH 
        60         70         80         90        100
KRKRSSGSFC YCHPDSETDE DEEEGDEQQR LLNTPRRKKL KSTSKYIYQT 
       110        120        130        140        150
LFLNGENSDI KICALGEEWS LHKIYLCQSG YFSSMFSGSW KESSMNIIEL 
       160        170        180        190        200
EIPDQNIDVE ALQVAFGSLY RDDVLIKPSR VVAILAAACL LQLDGLIQQC 
       210        220        230        240        250
GETMKETVNV KTVCGYYTSA GTYGLDSVKK KCLEWLLNNL MTHQNVELFK 
       260        270        280        290        300
ELSINVMKQL IGSSNLFVMQ VEMDIYTALK KWMFLQLVPS WNGSLKQLLT 
       310        320        330        340        350
ETDVWFSKQR KDFEGMAFLE TEQGKPFVSV FRHLRLQYII SDLASARIIE 
       360        370        380        390        400
QDAVVPSEWL SSVYKQQWFA MLRAEQDSEV GPQEINKEEL EGNSMRCGRK 
       410        420        430        440        450
LAKDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGSVSLQPRR 
       460        470        480        490        500
SIAFRLRLAS FDSSGKLICS RTTGYQILTL EKDQEQVVMN LDSRLLIFPL 
       510 
YICCNFLYIS PEKKN
Length:515
Mass (Da):58,685
Last modified:May 24, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDA310AEE9CE1AEEE
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AC019206 Genomic DNA Translation: AAY14865.1
CH471053 Genomic DNA Translation: EAW99842.1

NCBI Reference Sequences

More...RefSeqi		NP_848526.1, NM_178439.4

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Hs.293971
Hs.667102

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		64395

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:64395

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC019206 Genomic DNA Translation: AAY14865.1
CH471053 Genomic DNA Translation: EAW99842.1
RefSeqiNP_848526.1, NM_178439.4
UniGeneiHs.293971
Hs.667102

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Protein-protein interaction databases

IntActiQ53SE7, 58 interactors

Protocols and materials databases

The DNASU plasmid repository

More...DNASUi		64395
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi64395
KEGGihsa:64395

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		64395
EuPathDBiHostDB:ENSG00000087338.4
PharmGKBiPA143485477

Phylogenomic databases

eggNOGiKOG4682 Eukaryota
ENOG410XPEJ LUCA
HOVERGENiHBG051741
KOiK10485
OMAiGAFCYCH
OrthoDBi1111791at2759

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		GMCL1 human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		64395

Gene expression databases

BgeeiENSG00000087338 Expressed in 209 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR011705 BACK
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
PfamiView protein in Pfam
PF07707 BACK, 1 hit
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00875 BACK, 1 hit
SM00225 BTB, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ53SE7_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q53SE7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: February 13, 2019
This is version 107 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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