UniProtKB - Q53I19 (Q53I19_9HIV1)
Protein
Env polyprotein
Gene
gp41
Organism
Human immunodeficiency virus 1
Status
Functioni
GO - Molecular functioni
- structural molecule activity Source: InterPro
GO - Biological processi
- viral process Source: UniProtKB-KW
Keywordsi
Biological process | Host-virus interactionARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: Env polyproteinARBA annotation |
Gene namesi | Name:gp41Imported |
Organismi | Human immunodeficiency virus 1Imported |
Taxonomic identifieri | 11676 [NCBI] |
Taxonomic lineagei | Viruses › Riboviria › Pararnavirae › Artverviricota › Revtraviricetes › Ortervirales › Retroviridae › Orthoretrovirinae › Lentivirus |
Virus hosti | Homo sapiens (Human) [TaxID: 9606] |
Subcellular locationi
- Cell membrane ARBA annotation; Peripheral membrane protein ARBA annotation
- Cell membrane ARBA annotation; Single-pass type I membrane protein ARBA annotation
- Host cell membrane ARBA annotation; Peripheral membrane protein ARBA annotation
- Host cell membrane ARBA annotation; Single-pass type I membrane protein ARBA annotation
- Membrane ARBA annotation; Peripheral membrane protein ARBA annotation
- Membrane ARBA annotation; Single-pass type I membrane protein ARBA annotation
- Virion membrane ARBA annotation; Peripheral membrane protein ARBA annotation
- Virion membrane ARBA annotation; Single-pass type I membrane protein ARBA annotation
Keywords - Cellular componenti
Host cell membraneARBA annotation, Host membrane, Membrane, Viral envelope proteinImported, VirionPTM / Processingi
Keywords - PTMi
Cleavage on pair of basic residuesARBA annotation, Disulfide bondARBA annotationStructurei
3D structure databases
SMRi | Q53I19 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q53I19 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 143 | GP41InterPro annotationAdd BLAST | 143 |
Keywords - Domaini
Transmembrane, Transmembrane helixARBA annotationFamily and domain databases
CDDi | cd09909, HIV-1-like_HR1-HR2, 1 hit |
InterProi | View protein in InterPro IPR000328, GP41-like |
Pfami | View protein in Pfam PF00517, GP41, 1 hit |
i Sequence
Sequence statusi: Fragment.
Q53I19-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGAASLTLTV QARQLLSGIV QQQNDLLRAI EAQQHLLQLT VWGIKQLQAR
60 70 80 90 100
VLAVERYLKD QQLLGIWGCS GKLICTTAVP WNSSWSNKSQ DQIWHNMTWM
110 120 130 140
EWEREIENYT DLIYTLIEKS QNQQEKNEQE LLELDKWASL WNW
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 | |
Non-terminal residuei | 143 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AJ964928 Genomic RNA Translation: CAI79676.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AJ964928 Genomic RNA Translation: CAI79676.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
2OT5 | X-ray | 1.80 | A | 17-126 | [»] | |
3CP1 | X-ray | 2.00 | A | 7-50 | [»] | |
A | 99-134 | [»] | ||||
3CYO | X-ray | 2.10 | A | 7-50 | [»] | |
A | 99-134 | [»] | ||||
SMRi | Q53I19 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q53I19 |
Family and domain databases
CDDi | cd09909, HIV-1-like_HR1-HR2, 1 hit |
InterProi | View protein in InterPro IPR000328, GP41-like |
Pfami | View protein in Pfam PF00517, GP41, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q53I19_9HIV1 | |
Accessioni | Q53I19Primary (citable) accession number: Q53I19 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 24, 2005 |
Last sequence update: | May 24, 2005 | |
Last modified: | April 7, 2021 | |
This is version 48 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |