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UniProtKB - Q53H12 (AGK_HUMAN)

Protein

Acylglycerol kinase, mitochondrial

Gene

AGK

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Lipid kinase that can phosphorylate both monoacylglycerol and diacylglycerol to form lysophosphatidic acid (LPA) and phosphatidic acid (PA), respectively (PubMed:15939762). Does not phosphorylate sphingosine (PubMed:15939762). Independently of its lipid kinase activity, acts as a component of the TIM22 complex (PubMed:28712724, PubMed:28712726). The TIM22 complex mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane by forming a twin-pore translocase that uses the membrane potential as the external driving force (PubMed:28712724, PubMed:28712726). In the TIM22 complex, required for the import of a subset of metabolite carriers into mitochondria, such as ANT1/SLC25A4 and SLC25A24, while it is not required for the import of TIMM23 (PubMed:28712724). Overexpression increases the formation and secretion of LPA, resulting in transactivation of EGFR and activation of the downstream MAPK signaling pathway, leading to increased cell growth (PubMed:15939762).3 Publications

Caution

According to a report, the N-terminal hydrophobic region forms a transmembrane region that crosses the mitochondrion inner membrane (PubMed:28712726). According to another report, the N-terminal hydrophobic region associates with the membrane without crossing it (PubMed:28712724).2 Publications

Catalytic activityi

ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate.1 Publication
ATP + 1,2-diacyl-sn-glycerol = ADP + 1,2-diacyl-sn-glycerol 3-phosphate.1 Publication

Cofactori

Mg2+1 Publication

Pathwayi: glycerolipid metabolism

This protein is involved in the pathway glycerolipid metabolism, which is part of Lipid metabolism.1 Publication
View all proteins of this organism that are known to be involved in the pathway glycerolipid metabolism and in Lipid metabolism.

GO - Molecular functioni

View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

Keywordsi

Molecular functionKinase, Transferase
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BRENDAi2.7.1.94 2681
ReactomeiR-HSA-1483206 Glycerophospholipid biosynthesis
R-HSA-6802952 Signaling by BRAF and RAF fusions
SABIO-RKiQ53H12
UniPathwayi
UPA00230

Chemistry databases

SwissLipidsiSLP:000000638

Names & Taxonomyi

Protein namesi
Recommended name:
Acylglycerol kinase, mitochondrial1 Publication (EC:2.7.1.1071 Publication, EC:2.7.1.941 Publication)
Short name:
hAGK1 Publication
Alternative name(s):
Multiple substrate lipid kinase1 Publication
Short name:
HsMuLK1 Publication
Short name:
MuLK1 Publication
Short name:
Multi-substrate lipid kinase1 Publication
Gene namesi
Name:AGK1 PublicationImported
Synonyms:MULK1 Publication
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000006530.15
HGNCiHGNC:21869 AGK
MIMi610345 gene
neXtProtiNX_Q53H12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

Pathology & Biotechi

Involvement in diseasei

Mitochondrial DNA depletion syndrome 10 (MTDPS10)5 Publications
The disease is caused by mutations affecting the gene represented in this entry. The TIM22 complex and import of proteins into mitochondrion are affected in patients suffering of MTDPS10 (PubMed:28712726).1 Publication
Disease descriptionAn autosomal recessive mitochondrial disorder characterized by congenital cataracts, hypertrophic cardiomyopathy, skeletal myopathy, exercise intolerance, and lactic acidosis. Mental development is normal, but affected individuals may die early from cardiomyopathy.
See also OMIM:212350
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_079050137 – 422Missing in MTDPS10. 1 PublicationAdd BLAST286
Natural variantiVAR_079051291 – 422Missing in MTDPS10. 1 PublicationAdd BLAST132
Natural variantiVAR_079052327 – 422Missing in MTDPS10. 1 PublicationAdd BLAST96
Cataract 38 (CTRCT38)1 Publication
The disease is caused by mutations affecting the gene represented in this entry.
Disease descriptionAn opacification of the crystalline lens of the eye becoming evident at birth. It frequently results in visual impairment or blindness. Opacities vary in morphology, are often confined to a portion of the lens, and may be static or progressive. In general, the more posteriorly located and dense an opacity, the greater the impact on visual function.
See also OMIM:614691

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Mutagenesisi126G → E: Abolishes lipid kinase activity. Does not affect ability to associate with the TIM22 complex and mediate import of transmembrane proteins into the mitochondrial inner membrane. 3 Publications1

Keywords - Diseasei

Cardiomyopathy, Cataract, Disease mutation, Primary mitochondrial disease

Organism-specific databases

DisGeNETi55750
MalaCardsiAGK
MIMi212350 phenotype
614691 phenotype
OpenTargetsiENSG00000006530
Orphaneti1369 Congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome
98994 Total early-onset cataract
PharmGKBiPA162375851

Chemistry databases

ChEMBLiCHEMBL2417354

Polymorphism and mutation databases

BioMutaiAGK
DMDMi116248550

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002523801 – 422Acylglycerol kinase, mitochondrialAdd BLAST422

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei6N6-acetyllysineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ53H12
MaxQBiQ53H12
PaxDbiQ53H12
PeptideAtlasiQ53H12
PRIDEiQ53H12
ProteomicsDBi62491
62492 [Q53H12-2]

PTM databases

iPTMnetiQ53H12
PhosphoSitePlusiQ53H12
SwissPalmiQ53H12

Expressioni

Tissue specificityi

Highly expressed in muscle, heart, kidney and brain.1 Publication

Inductioni

Overexpressed in prostate cancer, suggesting that it may play a role in initiation and progression of prostate cancer, processes in which lysophosphatidic acid (LPA) plays key roles.1 Publication

Gene expression databases

BgeeiENSG00000006530 Expressed in 212 organ(s), highest expression level in secondary oocyte
CleanExiHS_AGK
ExpressionAtlasiQ53H12 baseline and differential
GenevisibleiQ53H12 HS

Organism-specific databases

HPAiHPA020959
HPA053471

Interactioni

Subunit structurei

Component of the TIM22 complex, which core is composed of TIMM22, associated with TIMM10 (TIMM10A and/or TIMM10B), TIMM9, AGK and TIMM29 (PubMed:28712724, PubMed:28712726).2 Publications

Protein-protein interaction databases

BioGridi120868, 31 interactors
IntActiQ53H12, 23 interactors
MINTiQ53H12
STRINGi9606.ENSP00000347581

Structurei

3D structure databases

ProteinModelPortaliQ53H12
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 199DAGKcPROSITE-ProRule annotationAdd BLAST142

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni15 – 31HydrophobicCuratedAdd BLAST17

Sequence similaritiesi

Belongs to the AGK family.Curated

Phylogenomic databases

eggNOGiKOG4435 Eukaryota
COG1597 LUCA
GeneTreeiENSGT00690000101761
HOGENOMiHOG000252977
HOVERGENiHBG080751
InParanoidiQ53H12
KOiK09881
OMAiSKKVRDP
OrthoDBiEOG091G06YD
PhylomeDBiQ53H12
TreeFamiTF320485

Family and domain databases

Gene3Di3.40.50.10330, 1 hit
InterProiView protein in InterPro
IPR017438 ATP-NAD_kinase_N
IPR001206 Diacylglycerol_kinase_cat_dom
IPR016064 NAD/diacylglycerol_kinase_sf
PfamiView protein in Pfam
PF00781 DAGK_cat, 1 hit
SMARTiView protein in SMART
SM00046 DAGKc, 1 hit
SUPFAMiSSF111331 SSF111331, 1 hit
PROSITEiView protein in PROSITE
PS50146 DAGK, 1 hit

Sequences (2+)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 5 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q53H12-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MTVFFKTLRN HWKKTTAGLC LLTWGGHWLY GKHCDNLLRR AACQEAQVFG 
        60         70         80         90        100
NQLIPPNAQV KKATVFLNPA ACKGKARTLF EKNAAPILHL SGMDVTIVKT 
       110        120        130        140        150
DYEGQAKKLL ELMENTDVII VAGGDGTLQE VVTGVLRRTD EATFSKIPIG 
       160        170        180        190        200
FIPLGETSSL SHTLFAESGN KVQHITDATL AIVKGETVPL DVLQIKGEKE 
       210        220        230        240        250
QPVFAMTGLR WGSFRDAGVK VSKYWYLGPL KIKAAHFFST LKEWPQTHQA 
       260        270        280        290        300
SISYTGPTER PPNEPEETPV QRPSLYRRIL RRLASYWAQP QDALSQEVSP 
       310        320        330        340        350
EVWKDVQLST IELSITTRNN QLDPTSKEDF LNICIEPDTI SKGDFITIGS 
       360        370        380        390        400
RKVRNPKLHV EGTECLQASQ CTLLIPEGAG GSFSIDSEEY EAMPVEVKLL 
       410        420 
PRKLQFFCDP RKREQMLTSP TQ
Length:422
Mass (Da):47,137
Last modified:October 17, 2006 - v2
Checksum:iF9D85658616B8970
GO
Isoform 2 (identifier: Q53H12-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     48-65: VFGNQLIPPNAQVKKATV → HYQDESRWEPTLSRTPGS
     66-422: Missing.

Note: No experimental confirmation available.
Show »
Length:65
Mass (Da):7,634
Checksum:i8F3133CE9A0B6D70
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9PC15E9PC15_HUMAN
Acylglycerol kinase, mitochondrial
AGK
394Annotation score:
E9PG39E9PG39_HUMAN
Acylglycerol kinase, mitochondrial
AGK
244Annotation score:
F8WDD1F8WDD1_HUMAN
Acylglycerol kinase, mitochondrial
AGK
46Annotation score:
A0A0G2JLG5A0A0G2JLG5_HUMAN
Acylglycerol kinase, mitochondrial
AGK
226Annotation score:
A0A0G2JLD0A0A0G2JLD0_HUMAN
Acylglycerol kinase, mitochondrial
AGK
51Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti94D → V in BAD96489 (Ref. 3) Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_0278483V → M. Corresponds to variant dbSNP:rs10262855Ensembl.1
Natural variantiVAR_079050137 – 422Missing in MTDPS10. 1 PublicationAdd BLAST286
Natural variantiVAR_079051291 – 422Missing in MTDPS10. 1 PublicationAdd BLAST132
Natural variantiVAR_079052327 – 422Missing in MTDPS10. 1 PublicationAdd BLAST96

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_02092548 – 65VFGNQ…KKATV → HYQDESRWEPTLSRTPGS in isoform 2. 1 PublicationAdd BLAST18
Alternative sequenceiVSP_02092666 – 422Missing in isoform 2. 1 PublicationAdd BLAST357

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ278150 mRNA Translation: CAB93536.1
AK001704 mRNA Translation: BAA91848.1
AK222769 mRNA Translation: BAD96489.1
AC004918 Genomic DNA No translation available.
AC073878 Genomic DNA No translation available.
AC099547 Genomic DNA Translation: AAS07537.1
BC009775 mRNA Translation: AAH09775.1
BC022777 mRNA Translation: AAH22777.1
CCDSiCCDS5865.1 [Q53H12-1]
RefSeqiNP_060708.1, NM_018238.3 [Q53H12-1]
XP_011514699.1, XM_011516397.2 [Q53H12-1]
UniGeneiHs.685880
Hs.699361
Hs.743318

Genome annotation databases

EnsembliENST00000355413; ENSP00000347581; ENSG00000006530 [Q53H12-1]
ENST00000492693; ENSP00000418789; ENSG00000006530 [Q53H12-2]
ENST00000575872; ENSP00000458417; ENSG00000262327
GeneIDi55750
KEGGihsa:55750
UCSCiuc003vwi.3 human [Q53H12-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ278150 mRNA Translation: CAB93536.1
AK001704 mRNA Translation: BAA91848.1
AK222769 mRNA Translation: BAD96489.1
AC004918 Genomic DNA No translation available.
AC073878 Genomic DNA No translation available.
AC099547 Genomic DNA Translation: AAS07537.1
BC009775 mRNA Translation: AAH09775.1
BC022777 mRNA Translation: AAH22777.1
CCDSiCCDS5865.1 [Q53H12-1]
RefSeqiNP_060708.1, NM_018238.3 [Q53H12-1]
XP_011514699.1, XM_011516397.2 [Q53H12-1]
UniGeneiHs.685880
Hs.699361
Hs.743318

3D structure databases

ProteinModelPortaliQ53H12
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi120868, 31 interactors
IntActiQ53H12, 23 interactors
MINTiQ53H12
STRINGi9606.ENSP00000347581

Chemistry databases

ChEMBLiCHEMBL2417354
SwissLipidsiSLP:000000638

PTM databases

iPTMnetiQ53H12
PhosphoSitePlusiQ53H12
SwissPalmiQ53H12

Polymorphism and mutation databases

BioMutaiAGK
DMDMi116248550

Proteomic databases

EPDiQ53H12
MaxQBiQ53H12
PaxDbiQ53H12
PeptideAtlasiQ53H12
PRIDEiQ53H12
ProteomicsDBi62491
62492 [Q53H12-2]

Protocols and materials databases

DNASUi55750
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000355413; ENSP00000347581; ENSG00000006530 [Q53H12-1]
ENST00000492693; ENSP00000418789; ENSG00000006530 [Q53H12-2]
ENST00000575872; ENSP00000458417; ENSG00000262327
GeneIDi55750
KEGGihsa:55750
UCSCiuc003vwi.3 human [Q53H12-1]

Organism-specific databases

CTDi55750
DisGeNETi55750
EuPathDBiHostDB:ENSG00000006530.15
GeneCardsiAGK
HGNCiHGNC:21869 AGK
HPAiHPA020959
HPA053471
MalaCardsiAGK
MIMi212350 phenotype
610345 gene
614691 phenotype
neXtProtiNX_Q53H12
OpenTargetsiENSG00000006530
Orphaneti1369 Congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome
98994 Total early-onset cataract
PharmGKBiPA162375851
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4435 Eukaryota
COG1597 LUCA
GeneTreeiENSGT00690000101761
HOGENOMiHOG000252977
HOVERGENiHBG080751
InParanoidiQ53H12
KOiK09881
OMAiSKKVRDP
OrthoDBiEOG091G06YD
PhylomeDBiQ53H12
TreeFamiTF320485

Enzyme and pathway databases

UniPathwayi
UPA00230

BRENDAi2.7.1.94 2681
ReactomeiR-HSA-1483206 Glycerophospholipid biosynthesis
R-HSA-6802952 Signaling by BRAF and RAF fusions
SABIO-RKiQ53H12

Miscellaneous databases

ChiTaRSiAGK human
GeneWikiiAGK_(gene)
GenomeRNAii55750
PROiPR:Q53H12
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000006530 Expressed in 212 organ(s), highest expression level in secondary oocyte
CleanExiHS_AGK
ExpressionAtlasiQ53H12 baseline and differential
GenevisibleiQ53H12 HS

Family and domain databases

Gene3Di3.40.50.10330, 1 hit
InterProiView protein in InterPro
IPR017438 ATP-NAD_kinase_N
IPR001206 Diacylglycerol_kinase_cat_dom
IPR016064 NAD/diacylglycerol_kinase_sf
PfamiView protein in Pfam
PF00781 DAGK_cat, 1 hit
SMARTiView protein in SMART
SM00046 DAGKc, 1 hit
SUPFAMiSSF111331 SSF111331, 1 hit
PROSITEiView protein in PROSITE
PS50146 DAGK, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiAGK_HUMAN
AccessioniPrimary (citable) accession number: Q53H12
Secondary accession number(s): Q75KN1, Q96GC3, Q9NP48
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: October 17, 2006
Last modified: November 7, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  6. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
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