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UniProtKB - Q52012 (Q52012_AGRFC)
Protein
Submitted name:
ABC transporter substrate-binding protein
Gene
accA
Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Functioni
GO - Biological processi
- transmembrane transport Source: InterPro
Protein family/group databases
TCDBi | 3.A.1.5.4, the atp-binding cassette (abc) superfamily |
Names & Taxonomyi
Protein namesi | Submitted name: ABC transporter substrate-binding proteinImportedSubmitted name: ABC transporter, substrate binding protein (Agrocinopines A and B)ImportedSubmitted name: AccAImported |
Gene namesi | Name:accAImported Ordered Locus Names:Atu6139Imported |
Encoded oni | Plasmid TiImported Plasmid pTiC58Imported Plasmid pTi_GV3101Imported |
Organismi | Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))Imported |
Taxonomic identifieri | 176299 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Alphaproteobacteria › Hyphomicrobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium tumefaciens complex › |
Proteomesi |
|
Subcellular locationi
Other locations
- Periplasm ARBA annotation
Plasma Membrane
- ATP-binding cassette (ABC) transporter complex Source: InterPro
Other locations
- outer membrane-bounded periplasmic space Source: UniProt
Keywords - Cellular componenti
PeriplasmARBA annotationPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 24 | Sequence analysisAdd BLAST | 24 | |
ChainiPRO_5014105286 | 25 – 521 | Sequence analysisAdd BLAST | 497 |
Structurei
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
PDBe-KBi | Search... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 84 – 426 | SBP_bac_5InterPro annotationAdd BLAST | 343 |
Sequence similaritiesi
Belongs to the bacterial solute-binding protein 5 family.ARBA annotation
Keywords - Domaini
SignalSequence analysisPhylogenomic databases
HOGENOMi | CLU_017028_7_4_5 |
OMAi | ANDAYWG |
Family and domain databases
InterProi | View protein in InterPro IPR030678, Peptide/Ni-bd IPR039424, SBP_5 IPR000914, SBP_5_dom IPR006311, TAT_signal |
PANTHERi | PTHR30290, PTHR30290, 1 hit |
Pfami | View protein in Pfam PF00496, SBP_bac_5, 1 hit |
PIRSFi | PIRSF002741, MppA, 1 hit |
PROSITEi | View protein in PROSITE PS51318, TAT, 1 hit |
i Sequence
Sequence statusi: Complete.
Q52012-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLKTNRRNFM MGTAAIAVAS TAGAKFTFAQ ERRALRLGVN GLPNSLEPVN
60 70 80 90 100
AISNVGPRIV NQIFDTLIAR DFFAKGAPGN AIDLVPALAE SWERIDEKSV
110 120 130 140 150
RFKLRQKVMF HDGVELTADD VAYTFSSERL WGPEAIKKIP LGKSYSLDFD
160 170 180 190 200
EPVVEDKYTV TLRTKTPSYL IETFVASWMS RIVPKEYYKK LGAVDFGNKP
210 220 230 240 250
VGTGPYKFVE FVAGDRVVLE ANDAYWGPKP TASKITYQIV AEPATRVAGL
260 270 280 290 300
ISGEYDIITT LTPDDIQLIN SYPDLETRGT LIENFHMFTF NMNQEVFKDK
310 320 330 340 350
KLRRALALAV NRPIMVEALW KKQASIPAGF NFPNYGETFD PKRKAMEYNV
360 370 380 390 400
EEAKRLVKES GYDGTPITYH TMGNYYANAM PALMMMIEMW KQIGVNVVMK
410 420 430 440 450
TYAPGSFPPD NQTWMRNWSN GQWMTDAYAT IVPEFGPNGQ VQKRWGWKAP
460 470 480 490 500
AEFNELCQKV TVLPNGKERF DAYNRMRDIF EEEAPAVILY QPYDVYAARK
510 520
DVHWKPVSFE MMEFRNNLSF G
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF010180 Genomic DNA Translation: AAC17197.1 AE007871 Genomic DNA Translation: AAK91103.1 KY000036 Genomic DNA Translation: ASK42673.1 |
PIRi | A48650 AI3244 |
RefSeqi | NP_396662.1, NC_003065.3 WP_010974902.1, NZ_KY000034.1 |
Genome annotation databases
EnsemblBacteriai | AAK91103; AAK91103; Atu6139 AYM09537; AYM09537; At1D1460_52960 KJX90192; KJX90192; SY94_5314 QCL98579; QCL98579; CFBP7129_30860 |
GeneIDi | 39477163 |
KEGGi | atu:Atu6139 |
PATRICi | fig|176299.10.peg.5346 fig|358.66.peg.322 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF010180 Genomic DNA Translation: AAC17197.1 AE007871 Genomic DNA Translation: AAK91103.1 KY000036 Genomic DNA Translation: ASK42673.1 |
PIRi | A48650 AI3244 |
RefSeqi | NP_396662.1, NC_003065.3 WP_010974902.1, NZ_KY000034.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
4RA1 | X-ray | 1.75 | A | 30-521 | [»] | |
4ZE8 | X-ray | 1.72 | A/B/C/D | 30-521 | [»] | |
4ZE9 | X-ray | 2.65 | A | 30-521 | [»] | |
4ZEB | X-ray | 1.89 | A/B | 30-521 | [»] | |
4ZEC | X-ray | 2.15 | A | 32-521 | [»] | |
4ZED | X-ray | 1.75 | A | 30-521 | [»] | |
4ZEI | X-ray | 2.30 | A | 30-521 | [»] | |
4ZEK | X-ray | 2.09 | A | 30-521 | [»] | |
6I7W | X-ray | 1.80 | A | 30-521 | [»] | |
ModBasei | Search... | |||||
SWISS-MODEL-Workspacei | Submit a new modelling project... | |||||
PDBe-KBi | Search... |
Protein family/group databases
TCDBi | 3.A.1.5.4, the atp-binding cassette (abc) superfamily |
Genome annotation databases
EnsemblBacteriai | AAK91103; AAK91103; Atu6139 AYM09537; AYM09537; At1D1460_52960 KJX90192; KJX90192; SY94_5314 QCL98579; QCL98579; CFBP7129_30860 |
GeneIDi | 39477163 |
KEGGi | atu:Atu6139 |
PATRICi | fig|176299.10.peg.5346 fig|358.66.peg.322 |
Phylogenomic databases
HOGENOMi | CLU_017028_7_4_5 |
OMAi | ANDAYWG |
Family and domain databases
InterProi | View protein in InterPro IPR030678, Peptide/Ni-bd IPR039424, SBP_5 IPR000914, SBP_5_dom IPR006311, TAT_signal |
PANTHERi | PTHR30290, PTHR30290, 1 hit |
Pfami | View protein in Pfam PF00496, SBP_bac_5, 1 hit |
PIRSFi | PIRSF002741, MppA, 1 hit |
PROSITEi | View protein in PROSITE PS51318, TAT, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | Q52012_AGRFC | |
Accessioni | Q52012Primary (citable) accession number: Q52012 Secondary accession number(s): A0A2Z2PIR6, Q44446, Q7D2F4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 1, 1996 |
Last sequence update: | August 1, 1998 | |
Last modified: | January 19, 2022 | |
This is version 102 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |