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Protein
Submitted name:

Integrin, beta-like 1

Gene

itgbl1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Integrin, beta-like 1Imported
Gene namesi
Name:itgbl1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-050522-410 itgbl1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500424565028 – 428Sequence analysisAdd BLAST401

Structurei

3D structure databases

ProteinModelPortaliQ4VBJ0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 82EGF_2InterPro annotationAdd BLAST35
Domaini89 – 119EGF_2InterPro annotationAdd BLAST31
Domaini182 – 209EGF_2InterPro annotationAdd BLAST28
Domaini278 – 303EGF_2InterPro annotationAdd BLAST26

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
HOGENOMiHOG000113115
HOVERGENiHBG052797
PhylomeDBiQ4VBJ0

Family and domain databases

InterProiView protein in InterPro
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 4 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 4 hits

Sequencei

Sequence statusi: Complete.

Q4VBJ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHAETLVNSV LVSLLFILLS AIRGSLQQSL RQVGGECKIS PESSLRRCRT
60 70 80 90 100
SDGLICSGRG TCECGICICQ VTEPGTFYGP RCECHDWVCP TYDGKTCGDH
110 120 130 140 150
GICNCGKCFC DENWFGESCQ YEEECSLSSK TSKDLCRNAQ GVVCSNAGTC
160 170 180 190 200
HCGSCMCHNP DGKSLISGRY CECDDSECLD EDSGEVCGGH GKCYCGNCYC
210 220 230 240 250
SAGWHGDKCE FQCAISPWES KRRCTSPDGK ICSNRGTCVC GECTCYDVDP
260 270 280 290 300
SGDWGDIHGE TCECDERSCH AMYDRYSDDF CSGHGQCNCG RCDCKEGWAG
310 320 330 340 350
RKCDHPLSCS LSVEASQKKC RGTSSLPCFG RGQCLCGQCT CHPPGDKRVH
360 370 380 390 400
GKNCECDDRQ CEDLNGEICG GKTHTHTHTH THTHTHTHTH THTHTHTHTH
410 420
THTHTHTHTH THTHTHTHTH TNSSIDKQ
Length:428
Mass (Da):46,925
Last modified:July 5, 2005 - v1
Checksum:iC07BFE0942D1E1F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095744 mRNA Translation: AAH95744.1
RefSeqiNP_001019243.1, NM_001024072.1
UniGeneiDr.41753

Genome annotation databases

GeneIDi554050
KEGGidre:554050

Similar proteinsi

Entry informationi

Entry nameiQ4VBJ0_DANRE
AccessioniPrimary (citable) accession number: Q4VBJ0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: February 28, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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