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Entry version 101 (12 Aug 2020)
Sequence version 3 (20 Apr 2010)
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Protein

Oxidation resistance protein 1

Gene

Oxr1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in protection from oxidative damage.By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Oxidation resistance protein 1
Alternative name(s):
Protein C7
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Oxr1
Synonyms:C7
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 7

Organism-specific databases

Rat genome database

More...
RGDi
621857, Oxr1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Mitochondrion

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002316471 – 839Oxidation resistance protein 1Add BLAST839

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei83PhosphoserineBy similarity1
Modified residuei111PhosphothreonineBy similarity1
Modified residuei194PhosphoserineCombined sources1
Modified residuei195PhosphoserineCombined sources1
Modified residuei197PhosphoserineCombined sources1
Modified residuei287PhosphoserineBy similarity1
Modified residuei327PhosphoserineCombined sources1
Modified residuei329PhosphoserineCombined sources1
Modified residuei334PhosphothreonineBy similarity1
Modified residuei339PhosphoserineCombined sources1
Modified residuei488PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q4V8B0

PRoteomics IDEntifications database

More...
PRIDEi
Q4V8B0

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q4V8B0

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q4V8B0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000056487, Expressed in frontal cortex and 20 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q4V8B0, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000010856

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q4V8B0

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini91 – 134LysMPROSITE-ProRule annotationAdd BLAST44
Domaini206 – 261GRAMAdd BLAST56
Domaini678 – 839TLDcPROSITE-ProRule annotationAdd BLAST162

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni543 – 570Mediates oxidative antimutator activityBy similarityAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi24 – 29Poly-Gly6
Compositional biasi198 – 201Poly-Glu4

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the OXR1 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2372, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155187

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q4V8B0

Database of Orthologous Groups

More...
OrthoDBi
767847at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q4V8B0

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00118, LysM, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.10.350.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018392, LysM_dom
IPR036779, LysM_dom_sf
IPR006571, TLDc_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01476, LysM, 1 hit
PF07534, TLD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00257, LysM, 1 hit
SM00584, TLDc, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51782, LYSM, 1 hit
PS51886, TLDC, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q4V8B0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDYLTTFTGK SGRLLRGTAS RLWGLGGGGE ARQVRFEDYL REPAPGDPGC
60 70 80 90 100
GPGELRPPSP TSPEGPDTGQ KKTLDKKDGR RMSFQKPKGT IEYTVESRDS
110 120 130 140 150
LNSIALKFDT TPNELVQLNK LFSRAVVTGQ VLYVPDPEYV SSVESSPSLS
160 170 180 190 200
PVSPLSPTSS EAEFDKTTTP DVVHPKEAPP SSTESSIRPA RVVSSTSEEE
210 220 230 240 250
EAFTEKFLKI NCKYITNGKG TVSGVLLVTP NNIMFDPHKT DPLVQENGCE
260 270 280 290 300
EYGIMCPMEE VMSAAMYKEI LDSKLKESLP IEVDQLSGRG FCHSKKMTGV
310 320 330 340 350
PAEETDSRSR DQGNDSVSTA PRSTEESLSE DVFTESELSP IREELPSSEL
360 370 380 390 400
RQEKSSDASS ESVQTVSQIE VESLTAASES ADVPDHTNAN SGRSSSEVGA
410 420 430 440 450
LSHETGLSSL EIATKEGDKA TGNLQEVSGP KEQSTDIKGQ DNQDSFHHEN
460 470 480 490 500
SLQQEAGEDS LSSGETVELT EKPTVLKDQQ GKELKRDSET EVEELRKLWK
510 520 530 540 550
THSMQQAKQQ RDTIQQVAQR ESKHRGAPAD AHGEGSSLLK EKRRHRLHKF
560 570 580 590 600
LCLRVGKPMR KTFVSQASAT MQQYAQRDKK HEYWFAVPQE RTDHLYAFFI
610 620 630 640 650
QWSPEIYAED TGEYTREPGF IVVKKMAESG PDEAPAGEAA AREWEITTRE
660 670 680 690 700
DINSKQAAPA KADLEPESFR PNLSDPSELL LPDQIEKLTK HLPPRTIGYP
710 720 730 740 750
WTLVYGTGKH GTSLKTLYRT MTGLDTPVLM VIKDSDGQVF GALASEPFKV
760 770 780 790 800
SDGFYGTGET FVFTFCPEFE VFKWTGDNMF FIKGDMDSLA FGGGGGEFAL
810 820 830
WLDGDLYHGR SHSCKTFGNH TLSKKEDFFI QDIEIWAFE
Length:839
Mass (Da):92,810
Last modified:April 20, 2010 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i0CC16D2DBDE2FB02
GO
Isoform 2 (identifier: Q4V8B0-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-510: Missing.
     511-645: RDTIQQVAQR...AGEAAAREWE → MEKAYTLIVF...ELRTLCRRLQ

Show »
Length:331
Mass (Da):37,765
Checksum:iF6D5B66B62B7951A
GO
Isoform 3 (identifier: Q4V8B0-3) [UniParc]FASTAAdd to basket
Also known as: C7C

The sequence of this isoform differs from the canonical sequence as follows:
     1-623: Missing.
     624-645: KKMAESGPDEAPAGEAAAREWE → MSRLWYGKKGRRHQQVNHKYTL

Show »
Length:216
Mass (Da):24,450
Checksum:i4E1A76CD1A9BE87E
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2K7Y2A0A0G2K7Y2_RAT
Oxidation resistance protein 1
Oxr1
873Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2KAL4A0A0G2KAL4_RAT
Oxidation resistance protein 1
Oxr1
758Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2JYS1A0A0G2JYS1_RAT
Oxidation resistance protein 1
Oxr1
804Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2JZ50A0A0G2JZ50_RAT
Oxidation resistance protein 1
Oxr1
837Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAI66763 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0178691 – 623Missing in isoform 3. 2 PublicationsAdd BLAST623
Alternative sequenceiVSP_0178701 – 510Missing in isoform 2. 1 PublicationAdd BLAST510
Alternative sequenceiVSP_017871511 – 645RDTIQ…AREWE → MEKAYTLIVFFLLLRLSFIL CGFPEATCFWRINHNEHLES NMRKDCGFILFTIPVHLVED HFRVLLDFPFPLRCAVCLAI LVSRNRILKEKQTAVLIVSD VLPMRFPTPQVVSVAEYHRR IDALNTEELRTLCRRLQ in isoform 2. 1 PublicationAdd BLAST135
Alternative sequenceiVSP_017872624 – 645KKMAE…AREWE → MSRLWYGKKGRRHQQVNHKY TL in isoform 3. 2 PublicationsAdd BLAST22

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF333986 mRNA Translation: AAK29401.1
AABR03055922 Genomic DNA No translation available.
AABR03056092 Genomic DNA No translation available.
AABR03059133 Genomic DNA No translation available.
AABR03060217 Genomic DNA No translation available.
BC081744 mRNA Translation: AAH81744.1
BC097465 mRNA Translation: AAH97465.1
BC166763 mRNA Translation: AAI66763.1 Different initiation.

NCBI Reference Sequences

More...
RefSeqi
NP_001184261.1, NM_001197332.1 [Q4V8B0-3]
NP_476494.2, NM_057153.3
XP_017450109.1, XM_017594620.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000079962; ENSRNOP00000074353; ENSRNOG00000056487 [Q4V8B0-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
117520

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:117520

UCSC genome browser

More...
UCSCi
RGD:621857, rat [Q4V8B0-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF333986 mRNA Translation: AAK29401.1
AABR03055922 Genomic DNA No translation available.
AABR03056092 Genomic DNA No translation available.
AABR03059133 Genomic DNA No translation available.
AABR03060217 Genomic DNA No translation available.
BC081744 mRNA Translation: AAH81744.1
BC097465 mRNA Translation: AAH97465.1
BC166763 mRNA Translation: AAI66763.1 Different initiation.
RefSeqiNP_001184261.1, NM_001197332.1 [Q4V8B0-3]
NP_476494.2, NM_057153.3
XP_017450109.1, XM_017594620.1

3D structure databases

SMRiQ4V8B0
ModBaseiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000010856

PTM databases

iPTMnetiQ4V8B0
PhosphoSitePlusiQ4V8B0

Proteomic databases

PaxDbiQ4V8B0
PRIDEiQ4V8B0

Genome annotation databases

EnsembliENSRNOT00000079962; ENSRNOP00000074353; ENSRNOG00000056487 [Q4V8B0-3]
GeneIDi117520
KEGGirno:117520
UCSCiRGD:621857, rat [Q4V8B0-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
55074
RGDi621857, Oxr1

Phylogenomic databases

eggNOGiKOG2372, Eukaryota
GeneTreeiENSGT00940000155187
InParanoidiQ4V8B0
OrthoDBi767847at2759
PhylomeDBiQ4V8B0

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q4V8B0

Gene expression databases

BgeeiENSRNOG00000056487, Expressed in frontal cortex and 20 other tissues
ExpressionAtlasiQ4V8B0, baseline and differential

Family and domain databases

CDDicd00118, LysM, 1 hit
Gene3Di3.10.350.10, 1 hit
InterProiView protein in InterPro
IPR018392, LysM_dom
IPR036779, LysM_dom_sf
IPR006571, TLDc_dom
PfamiView protein in Pfam
PF01476, LysM, 1 hit
PF07534, TLD, 1 hit
SMARTiView protein in SMART
SM00257, LysM, 1 hit
SM00584, TLDc, 1 hit
PROSITEiView protein in PROSITE
PS51782, LYSM, 1 hit
PS51886, TLDC, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiOXR1_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q4V8B0
Secondary accession number(s): B2RYF9, Q99MK0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 20, 2010
Last modified: August 12, 2020
This is version 101 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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