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Protein
Submitted name:

Chromosome undetermined SCAF10255, whole genome shotgun sequence

Gene

MAP1LC3C

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome undetermined SCAF10255, whole genome shotgun sequenceImported
Submitted name:
Microtubule associated protein 1 light chain 3 gammaImported
Gene namesi
Name:MAP1LC3CImported
ORF Names:GSTENG00008303001Imported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)Imported
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon
Proteomesi
  • UP000007303 Componenti: Unassembled WGS sequence

Subcellular locationi

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi128Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000007394

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOVERGENiHBG051706
KOiK10435
OMAiTQFVTII
OrthoDBiEOG091G18ST
TreeFamiTF312964

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR027731 MAP1A/MAP1B_LC3C
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PTHR10969:SF41 PTHR10969:SF41, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Fragment.

Q4T2K1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPLHSRPQP SSKPFKQRKN FATRKQEVAG IRSKFPNKIP VIIERYDREK
60 70 80 90 100
YLPPLDKTKF LVPHELTMTQ FVTIIRNRMA LMPTQAFYLL VNHSGLASMS
110 120
LTMAQVYKDH QDADGFLYMT YASQEMFGR
Length:129
Mass (Da):15,026
Last modified:July 19, 2005 - v1
Checksum:iCEB3226160ACBF1C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei129Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01010255 Genomic DNA Translation: CAF92881.1

Genome annotation databases

EnsembliENSTNIT00000007552; ENSTNIP00000007394; ENSTNIG00000004740
KEGGitng:GSTEN00008303G001

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01010255 Genomic DNA Translation: CAF92881.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000007394

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTNIT00000007552; ENSTNIP00000007394; ENSTNIG00000004740
KEGGitng:GSTEN00008303G001

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOVERGENiHBG051706
KOiK10435
OMAiTQFVTII
OrthoDBiEOG091G18ST
TreeFamiTF312964

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR027731 MAP1A/MAP1B_LC3C
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PTHR10969:SF41 PTHR10969:SF41, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ4T2K1_TETNG
AccessioniPrimary (citable) accession number: Q4T2K1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: June 20, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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