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Protein
Submitted name:

Chromosome 4 SCAF14575, whole genome shotgun sequence

Gene

GSTENG00017240001

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 4 SCAF14575, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSTENG00017240001Imported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)Imported
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon

Structurei

3D structure databases

ProteinModelPortaliQ4SJF1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 387WD_REPEATS_REGIONInterPro annotationAdd BLAST238
Repeati150 – 182WDPROSITE-ProRule annotationAdd BLAST33
Repeati251 – 293WDPROSITE-ProRule annotationAdd BLAST43
Repeati300 – 332WDPROSITE-ProRule annotationAdd BLAST33
Repeati356 – 381WDPROSITE-ProRule annotationAdd BLAST26

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili39 – 59Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, WD repeatPROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000230587
HOVERGENiHBG108671

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 3 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 6 hits
SUPFAMiSSF50978 SSF50978, 2 hits
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 4 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Fragment.

Q4SJF1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DKMSEDGDIA SVMGFSGFGK KARTFDLEAI FEQTRRTAIE RSQHVLEERQ
60 70 80 90 100
RALEQEEEVA VTFQFVFQLQ MSCRVANISP CPRKPQSDSS GSSDSDSDSD
110 120 130 140 150
LVGPPLPRQY SDEHMKQGDT GSDDDEEEDA SDAEEDNPVR KIPDSHEITL
160 170 180 190 200
QHGNKTVSAL ALDPSGARLV TGGYDYDVKF WDFAGMDQAL QAFRSLQPCE
210 220 230 240 250
CHQIKSLQYS ITGDVVLVAS GNAQAKVLDR DGFNVMECIK GDQYIVDMVN
260 270 280 290 300
TKGHTAMLNG GCWHPKIKEE FMTCSNDGTV RTWDVKSEKQ HKSVFKPRSF
310 320 330 340 350
QGKKVVPTCC TYSRDGKLIA AGCQDGTIQI WDRNLSVHTK FHCRQAHIPG
360 370 380 390 400
SDTSCLAFSY DGKTLASRGG DDTLKMWDIR NFRQPVNAAT GLTNYFAMTD
410 420 430 440 450
CCFSPDDKLL ITGTSVKKDE GNGKLAFFDR MSFEKVHEIE VTNATPRAQP
460 470 480 490 500
WTPRCAGRLM LFGNFFVTYV GPSNRAVTRQ PSSRARWDPS PVHHLQPESR
510 520 530 540 550
SRTSKTNVVD KPGSNLAPHP NTNTHPFFSF FFLQSVIRCL WHPKLNQIMV
560 570 580 590 600
GTGNGLAKVY YDPIKSHRYV RFGGWGGPWD QVSRIHHLLF LNKSLTDLTS
610 620 630 640
GCFRGAMLCV VKSKRKDKHA EALTQDYIIT RKFDTFGTSQ KD
Length:642
Mass (Da):71,933
Last modified:July 19, 2005 - v1
Checksum:i0D84FAACFCA3F6A0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01014575 Genomic DNA Translation: CAF99231.1

Genome annotation databases

KEGGitng:GSTEN00017240G001

Similar proteinsi

Entry informationi

Entry nameiQ4SJF1_TETNG
AccessioniPrimary (citable) accession number: Q4SJF1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: February 28, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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