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Protein
Submitted name:

Chromosome 9 SCAF14991, whole genome shotgun sequence

Gene

GSTENG00027988001

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIon channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation
Biological processIon transport, Potassium transport, Transport
LigandPotassium

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 9 SCAF14991, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSTENG00027988001Imported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)Imported
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei164 – 188HelicalSequence analysisAdd BLAST25
Transmembranei219 – 240HelicalSequence analysisAdd BLAST22
Transmembranei247 – 265HelicalSequence analysisAdd BLAST19
Transmembranei325 – 346HelicalSequence analysisAdd BLAST22
Transmembranei386 – 407HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ4RW79
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 133BTBInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1545 Eukaryota
COG1226 LUCA
HOVERGENiHBG052230
KOiK04875

Family and domain databases

Gene3Di1.20.120.350, 1 hit
InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR005821 Ion_trans_dom
IPR003968 K_chnl_volt-dep_Kv
IPR003972 K_chnl_volt-dep_Kv1
IPR004049 K_chnl_volt-dep_Kv1.2
IPR004050 K_chnl_volt-dep_Kv1.3
IPR011333 SKP1/BTB/POZ_sf
IPR003131 T1-type_BTB
IPR028325 VG_K_chnl
IPR027359 Volt_channel_dom_sf
PANTHERiPTHR11537 PTHR11537, 1 hit
PTHR11537:SF23 PTHR11537:SF23, 1 hit
PfamiView protein in Pfam
PF02214 BTB_2, 1 hit
PF00520 Ion_trans, 1 hit
PRINTSiPR00169 KCHANNEL
PR01510 KV13CHANNEL
PR01491 KVCHANNEL
PR01496 SHAKERCHANEL
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit

Sequencei

Sequence statusi: Fragment.

Q4RW79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVATGDPAD EAVAHPGQPH DRYDPELDHE CCERVVINIS GLRFETQLKT
60 70 80 90 100
LSQFPETLLG DPKKRMRYFD PLRNEYFFDR NRPSFDAILY YYQSGGRLRR
110 120 130 140 150
PVNVPIDIFS EEIRFYELGE EAMEIFREDE GFIKEEERPL PDNEFQRQVW
160 170 180 190 200
LLFEYPESSG AARIIAIISV MVILISIVSF CLETLPVFRN ENVEMYRYPL
210 220 230 240 250
NSIFNATEVY ESSYFTDPFF IVETLCIIWF SFEFLVRFFA CPSKAGFFGN
260 270 280 290 300
IMNIIDIVAI IPYFITLGTE LAERREDSPG GQQAMSLAIL RVIRLVRVFR
310 320 330 340 350
IFKLSRHSKG LQILGQTLKA SMRELGLLIF FLFIGVILFS SAVYFAEADE
360 370 380 390 400
PQTQFDSIPE AFWWAVVSMT TVGYGDMVPT TIGGKIVGSL CAIAGVLTIA
410 420
LPVPVIVSNF NYFYHRETEG EEQAQ
Length:425
Mass (Da):48,761
Last modified:July 19, 2005 - v1
Checksum:iCE647E54539657FC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei425Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01014991 Genomic DNA Translation: CAG07353.1

Genome annotation databases

KEGGitng:GSTEN00027988G001

Similar proteinsi

Entry informationi

Entry nameiQ4RW79_TETNG
AccessioniPrimary (citable) accession number: Q4RW79
Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: February 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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