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Entry version 122 (03 Jul 2019)
Sequence version 3 (20 Apr 2010)
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Protein

Oxidation resistance protein 1

Gene

Oxr1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in protection from oxidative damage.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Oxidation resistance protein 1
Alternative name(s):
Protein C7
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Oxr1
Synonyms:C7, Gm1238
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 15

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2179326 Oxr1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Mitochondrion, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002316461 – 866Oxidation resistance protein 1Add BLAST866

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei90PhosphoserineBy similarity1
Modified residuei118PhosphothreonineCombined sources1
Modified residuei201PhosphoserineCombined sources1
Modified residuei202PhosphoserineBy similarity1
Modified residuei204PhosphoserineCombined sources1
Modified residuei294PhosphoserineCombined sources1
Modified residuei334PhosphoserineCombined sources1
Modified residuei336PhosphoserineCombined sources1
Modified residuei341PhosphothreonineCombined sources1
Modified residuei346PhosphoserineCombined sources1
Modified residuei488PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

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jPOSTi
Q4KMM3

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q4KMM3

PeptideAtlas

More...
PeptideAtlasi
Q4KMM3

PRoteomics IDEntifications database

More...
PRIDEi
Q4KMM3

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q4KMM3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q4KMM3

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q4KMM3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Highly expressed in brain and testis.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000022307 Expressed in 273 organ(s), highest expression level in medial dorsal nucleus of thalamus

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q4KMM3 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q4KMM3 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

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BioGridi
228391, 1 interactor

Protein interaction database and analysis system

More...
IntActi
Q4KMM3, 2 interactors

Molecular INTeraction database

More...
MINTi
Q4KMM3

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000105926

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q4KMM3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini98 – 141LysMPROSITE-ProRule annotationAdd BLAST44
Domaini213 – 268GRAMAdd BLAST56
Domaini705 – 866TLDcPROSITE-ProRule annotationAdd BLAST162

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni543 – 570Mediates oxidative antimutator activityBy similarityAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi205 – 208Poly-Glu4

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the OXR1 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2372 Eukaryota
ENOG4111QBZ LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155187

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000060321

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q4KMM3

Database of Orthologous Groups

More...
OrthoDBi
767847at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q4KMM3

TreeFam database of animal gene trees

More...
TreeFami
TF313530

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00118 LysM, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.10.350.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR018392 LysM_dom
IPR036779 LysM_dom_sf
IPR006571 TLDc_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01476 LysM, 1 hit
PF07534 TLD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00257 LysM, 1 hit
SM00584 TLDc, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51782 LYSM, 1 hit
PS51886 TLDC, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 4 described isoforms and 9 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q4KMM3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSVSNLSWLK KKSQSVDITA PGFNPLGGAG KQAPQASKPP APKTPIIEEE
60 70 80 90 100
QNNSANTQKH PSRKSELKRF YTIDTGQKKT LDKKDGRRMS FQKPKGTIEY
110 120 130 140 150
TVESRDSLNS IALKFDTTPN ELVQLNKLFS RAVVTGQVLY VPDPEYVSSV
160 170 180 190 200
ESSPSLSPVS PLSPTSSEAE FDKTTTPDVA HPKEAPPAST VSGIRPARVV
210 220 230 240 250
SSTSEEEEAF TEKFLKINCK YITIGKGTVS GVLLVTPNNI MFDPHKTDPL
260 270 280 290 300
VQENGCEEYG IMCPMEEVMS AAMYKEILDS KIKESLPIEL DQLSGRGSCH
310 320 330 340 350
SKKATGVSAE DADPRARDQG NDSASTAPRS TEESLSEDAF TESELSPIRE
360 370 380 390 400
ELLSSEPRQE KSSDASSESV QTVSQMEVQS LTATSEAANV PDRTSSNPGA
410 420 430 440 450
LSHETGLSGL ETATKGGDKA TESLQEVSGP KEQSTEVKGQ DNQDSSHQES
460 470 480 490 500
SLQQEAGEDS VSSGETVELK EKPAVLKDQQ GQELKRDSET EVEELRKLWK
510 520 530 540 550
THSMQQAKQQ RDTIQQVSQR ESKHSSAAAD AHGEGSSLLK EKRRHRLHKF
560 570 580 590 600
LCLRVGKPMR KTFVSQASAT MQQYAQRDKK HEYWFAVPQE RTDHLYAFFI
610 620 630 640 650
QWSPEIYAED SGEYTREPGF IVVKKMDESE ANEAPAGEAA AREWEVVSVA
660 670 680 690 700
EYHRRIDALN TEELRTLCRR LQITTREDIN SKQVAPAKAD LEPESFRPNL
710 720 730 740 750
SDPSELLLPD QIEKLTKHLP PRTIGYPWTL VYGTGKHGTS LKTLYRTMTG
760 770 780 790 800
LDTPVLMVIK DSDGQVFGAL ASEPFKVSDG FYGTGETFVF TFCPEFEVFK
810 820 830 840 850
WTGDNMFFIK GDMDSLAFGG GGGEFALWLD GDLYHGRSHS CKTFGNHTLS
860
KKEDFFIQDI EIWAFE
Length:866
Mass (Da):95,912
Last modified:April 20, 2010 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i15FB6B37144B1668
GO
Isoform 2 (identifier: Q4KMM3-2) [UniParc]FASTAAdd to basket
Also known as: C7B

The sequence of this isoform differs from the canonical sequence as follows:
     1-88: Missing.

Show »
Length:778
Mass (Da):86,240
Checksum:iDEB2C7A23699830B
GO
Isoform 3 (identifier: Q4KMM3-3) [UniParc]FASTAAdd to basket
Also known as: C7A

The sequence of this isoform differs from the canonical sequence as follows:
     1-88: Missing.
     646-672: Missing.

Show »
Length:751
Mass (Da):83,016
Checksum:i797716DA0A254741
GO
Isoform 4 (identifier: Q4KMM3-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     646-672: Missing.

Show »
Length:839
Mass (Da):92,688
Checksum:iE8D5AA39662B4252
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9Q0A7E9Q0A7_MOUSE
Oxidation resistance protein 1
Oxr1
832Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8VI09A0A2R8VI09_MOUSE
Oxidation resistance protein 1
Oxr1
399Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8VKF8A0A2R8VKF8_MOUSE
Oxidation resistance protein 1
Oxr1
106Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8W6N3A0A2R8W6N3_MOUSE
Oxidation resistance protein 1
Oxr1
574Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8W6J0A0A2R8W6J0_MOUSE
Oxidation resistance protein 1
Oxr1
44Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B1H3M0B1H3M0_MOUSE
OXR1 short isoform C7C
Oxr1
216Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8VHT3A0A2R8VHT3_MOUSE
Oxidation resistance protein 1
Oxr1
198Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8VHF5A0A2R8VHF5_MOUSE
Oxidation resistance protein 1
Oxr1
109Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8VHS5A0A2R8VHS5_MOUSE
Oxidation resistance protein 1
Oxr1
77Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH03927 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AAH98491 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence BAE34619 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti107 – 109SLN → PLY in AAK29400 (PubMed:11237729).Curated3
Sequence conflicti156L → H in AAK29400 (PubMed:11237729).Curated1
Sequence conflicti308S → A in AAH89183 (PubMed:15489334).Curated1
Sequence conflicti308S → A in AAH98491 (PubMed:15489334).Curated1
Sequence conflicti435 – 437TEV → PEI in AAH89183 (PubMed:15489334).Curated3
Sequence conflicti435 – 437TEV → PEI in AAH98491 (PubMed:15489334).Curated3
Sequence conflicti451S → L in AAH89183 (PubMed:15489334).Curated1
Sequence conflicti451S → L in AAH98491 (PubMed:15489334).Curated1
Sequence conflicti814D → G in AAH98491 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0390151 – 88Missing in isoform 2 and isoform 3. 2 PublicationsAdd BLAST88
Alternative sequenceiVSP_039016646 – 672Missing in isoform 3 and isoform 4. 2 PublicationsAdd BLAST27

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF324899 mRNA Translation: AAK30368.1
AF333985 mRNA Translation: AAK29400.1
AK158703 mRNA Translation: BAE34619.1 Different initiation.
BC003927 mRNA Translation: AAH03927.1 Different initiation.
BC089183 mRNA Translation: AAH89183.1
BC098491 mRNA Translation: AAH98491.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS27448.1 [Q4KMM3-2]
CCDS49598.1 [Q4KMM3-1]
CCDS49600.1 [Q4KMM3-3]

NCBI Reference Sequences

More...
RefSeqi
NP_001123635.1, NM_001130163.1 [Q4KMM3-3]
NP_001123636.1, NM_001130164.1
NP_001123637.1, NM_001130165.1
NP_001123638.1, NM_001130166.1 [Q4KMM3-1]
NP_570955.1, NM_130885.2 [Q4KMM3-2]
XP_017171979.1, XM_017316490.1
XP_017171980.1, XM_017316491.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000022918; ENSMUSP00000022918; ENSMUSG00000022307 [Q4KMM3-2]
ENSMUST00000090095; ENSMUSP00000087553; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000090096; ENSMUSP00000087554; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000110297; ENSMUSP00000105926; ENSMUSG00000022307 [Q4KMM3-1]
ENSMUST00000179393; ENSMUSP00000136923; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000230203; ENSMUSP00000155237; ENSMUSG00000022307 [Q4KMM3-4]

Database of genes from NCBI RefSeq genomes

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GeneIDi
170719

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
mmu:170719

UCSC genome browser

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UCSCi
uc007vot.2 mouse [Q4KMM3-1]
uc007vpa.1 mouse [Q4KMM3-3]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF324899 mRNA Translation: AAK30368.1
AF333985 mRNA Translation: AAK29400.1
AK158703 mRNA Translation: BAE34619.1 Different initiation.
BC003927 mRNA Translation: AAH03927.1 Different initiation.
BC089183 mRNA Translation: AAH89183.1
BC098491 mRNA Translation: AAH98491.1 Different initiation.
CCDSiCCDS27448.1 [Q4KMM3-2]
CCDS49598.1 [Q4KMM3-1]
CCDS49600.1 [Q4KMM3-3]
RefSeqiNP_001123635.1, NM_001130163.1 [Q4KMM3-3]
NP_001123636.1, NM_001130164.1
NP_001123637.1, NM_001130165.1
NP_001123638.1, NM_001130166.1 [Q4KMM3-1]
NP_570955.1, NM_130885.2 [Q4KMM3-2]
XP_017171979.1, XM_017316490.1
XP_017171980.1, XM_017316491.1

3D structure databases

SMRiQ4KMM3
ModBaseiSearch...

Protein-protein interaction databases

BioGridi228391, 1 interactor
IntActiQ4KMM3, 2 interactors
MINTiQ4KMM3
STRINGi10090.ENSMUSP00000105926

PTM databases

iPTMnetiQ4KMM3
PhosphoSitePlusiQ4KMM3
SwissPalmiQ4KMM3

Proteomic databases

jPOSTiQ4KMM3
PaxDbiQ4KMM3
PeptideAtlasiQ4KMM3
PRIDEiQ4KMM3

Protocols and materials databases

The DNASU plasmid repository

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DNASUi
170719
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000022918; ENSMUSP00000022918; ENSMUSG00000022307 [Q4KMM3-2]
ENSMUST00000090095; ENSMUSP00000087553; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000090096; ENSMUSP00000087554; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000110297; ENSMUSP00000105926; ENSMUSG00000022307 [Q4KMM3-1]
ENSMUST00000179393; ENSMUSP00000136923; ENSMUSG00000022307 [Q4KMM3-3]
ENSMUST00000230203; ENSMUSP00000155237; ENSMUSG00000022307 [Q4KMM3-4]
GeneIDi170719
KEGGimmu:170719
UCSCiuc007vot.2 mouse [Q4KMM3-1]
uc007vpa.1 mouse [Q4KMM3-3]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
55074
MGIiMGI:2179326 Oxr1

Phylogenomic databases

eggNOGiKOG2372 Eukaryota
ENOG4111QBZ LUCA
GeneTreeiENSGT00940000155187
HOGENOMiHOG000060321
InParanoidiQ4KMM3
OrthoDBi767847at2759
PhylomeDBiQ4KMM3
TreeFamiTF313530

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Oxr1 mouse

Protein Ontology

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PROi
PR:Q4KMM3

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000022307 Expressed in 273 organ(s), highest expression level in medial dorsal nucleus of thalamus
ExpressionAtlasiQ4KMM3 baseline and differential
GenevisibleiQ4KMM3 MM

Family and domain databases

CDDicd00118 LysM, 1 hit
Gene3Di3.10.350.10, 1 hit
InterProiView protein in InterPro
IPR018392 LysM_dom
IPR036779 LysM_dom_sf
IPR006571 TLDc_dom
PfamiView protein in Pfam
PF01476 LysM, 1 hit
PF07534 TLD, 1 hit
SMARTiView protein in SMART
SM00257 LysM, 1 hit
SM00584 TLDc, 1 hit
PROSITEiView protein in PROSITE
PS51782 LYSM, 1 hit
PS51886 TLDC, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiOXR1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q4KMM3
Secondary accession number(s): Q5FWW1
, Q99L06, Q99MK1, Q99MP4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 20, 2010
Last modified: July 3, 2019
This is version 122 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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