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Protein
Submitted name:

Itgb2 protein

Gene

Itgb2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Itgb2 proteinImported
Gene namesi
Name:Itgb2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei248 – 270HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ4KLK5
SMRiQ4KLK5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini170 – 247Integrin_B_tailInterPro annotationAdd BLAST78
Domaini271 – 316Integrin_b_cytInterPro annotationAdd BLAST46

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
PhylomeDBiQ4KLK5

Family and domain databases

InterProiView protein in InterPro
IPR015812 Integrin_bsu
IPR015439 Integrin_bsu-2
IPR014836 Integrin_bsu_cyt_dom
IPR012896 Integrin_bsu_tail
IPR036349 Integrin_bsu_tail_dom_sf
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF15 PTHR10082:SF15, 1 hit
PfamiView protein in Pfam
PF08725 Integrin_b_cyt, 1 hit
PF07965 Integrin_B_tail, 1 hit
PRINTSiPR01186 INTEGRINB
SMARTiView protein in SMART
SM01241 Integrin_b_cyt, 1 hit
SM01242 Integrin_B_tail, 1 hit
SUPFAMiSSF69687 SSF69687, 1 hit
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 1 hit

Sequencei

Sequence statusi: Complete.

Q4KLK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVPIPGADL SATLPHHTRC ESGYIGKNCE CQTQGRSSQE LEGNCRKDNS
60 70 80 90 100
SIVCSGLGDC ICGQCVCHTS DIPNKVIFGQ YCECDNFNCE RYDGQVCGGL
110 120 130 140 150
KRGSCSCGQC NCKEGFEGSA CQCQRSTTGC LNARLVECSG RGRCQCNRCI
160 170 180 190 200
CEKGYQPPLC EECPGCPLPC STYVFCAECL KFDKGPFQKN CSVQCANVTL
210 220 230 240 250
QTVPFKKKPC KERDSEGCWI TYTLQQKDGN AYNIHVDDDR ECVKGPNVAA
260 270 280 290 300
IIGGTVAGVV LIGVLLLVIW KALTHLTDLN EYRRFEKEKL KSQWNNDNPL
310
FKSATTTVMN PKFAES
Length:316
Mass (Da):34,629
Last modified:August 2, 2005 - v1
Checksum:i822785BF31B6F2A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC099151 mRNA Translation: AAH99151.1
UniGeneiRn.42962

Genome annotation databases

UCSCiRGD:1305581 rat

Entry informationi

Entry nameiQ4KLK5_RAT
AccessioniPrimary (citable) accession number: Q4KLK5
Entry historyiIntegrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: May 23, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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