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UniProtKB - Q4G0F8 (UBN1_MOUSE)

Entry version 113 (22 Apr 2020)
Sequence version 1 (30 Aug 2005)
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Protein

Ubinuclein-1

Gene

Ubn1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as a novel regulator of senescence. Involved in the formation of senescence-associated heterochromatin foci (SAHF), which represses expression of proliferation-promoting genes. Binds to proliferation-promoting genes. May be required for replication-independent chromatin assembly (By similarity).By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionChromatin regulator, DNA-binding

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-MMU-2559584 Formation of Senescence-Associated Heterochromatin Foci (SAHF)

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Ubinuclein-1
Alternative name(s):
Ubiquitously expressed nuclear protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Ubn1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1891307 Ubn1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell junction, Nucleus, Tight junction

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003706911 – 1135Ubinuclein-1Add BLAST1135

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei166PhosphothreonineBy similarity1
Modified residuei173PhosphoserineBy similarity1
Modified residuei175PhosphoserineBy similarity1
Modified residuei222N6-acetyllysineBy similarity1
Modified residuei323PhosphoserineBy similarity1
Modified residuei336PhosphoserineBy similarity1
Modified residuei338PhosphoserineBy similarity1
Modified residuei493PhosphoserineBy similarity1
Modified residuei660PhosphoserineBy similarity1
Modified residuei677PhosphoserineBy similarity1
Modified residuei1028PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q4G0F8

PeptideAtlas

More...PeptideAtlasi		Q4G0F8

PRoteomics IDEntifications database

More...PRIDEi		Q4G0F8

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q4G0F8

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q4G0F8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in bile canaliculi in liver, in bronchiolar epithelium in lung and in tubular structures of gland ducts inside the olfactory epithelium and tongue epithelium.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000039473 Expressed in ear and 270 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q4G0F8 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q4G0F8 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of a complex that includes at least ASF1A, CABIN1, HIRA, histone H3.3 and UBN1.

Interacts with HIRA (via WD repeat domain); the interaction is direct.

Interacts with ASF1A, CEBPA, TJP1, TJP2 and TJP3 (By similarity).

By similarity

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		228360, 2 interactors

Protein interaction database and analysis system

More...IntActi		Q4G0F8, 1 interactor

Molecular INTeraction database

More...MINTi		Q4G0F8

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000061843

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q4G0F8 protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q4G0F8

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili476 – 539Sequence analysisAdd BLAST64

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi181 – 261Lys-richAdd BLAST81
Compositional biasi861 – 1032Ser-richAdd BLAST172

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ubinuclein family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410KCZH Eukaryota
ENOG410XREY LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000158857

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_007400_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q4G0F8

KEGG Orthology (KO)

More...KOi		K17492

Identification of Orthologs from Complete Genome Data

More...OMAi		KQRFFTQ

Database of Orthologous Groups

More...OrthoDBi		469344at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q4G0F8

TreeFam database of animal gene trees

More...TreeFami		TF326088

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR014840 HRD
IPR026936 Ubinuclein-1
IPR026947 UBN_middle_dom

The PANTHER Classification System

More...PANTHERi		PTHR21669:SF12 PTHR21669:SF12, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF08729 HUN, 1 hit
PF14075 UBN_AB, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q4G0F8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSEPHRVQFT SVPGSLNPAF LKKSRKEEVG GTEQHQDCEP AAAAVRITLT 
        60         70         80         90        100
LFEPDHKRCP EFFYPELVKN IRGKVKGLHP GDKKKDVLDP FNDEEKERHK 
       110        120        130        140        150
VEALARKFEE KYGGKKRRKD RIQDLIDMGY GYDESDSFID NSEAYDELVP 
       160        170        180        190        200
ASLTTKYGGF YINSGTLQFR QASESEDDFI KEKKKKSPKK RKLKEGGEKI 
       210        220        230        240        250
KKKKKDDTYD KEKKSKKSKF SKAGFTALNA SKEKKKKKYS GSLSVREMLK 
       260        270        280        290        300
KFQKEKEAQK KREEEHKPVA VSSIEAQGLR ELEGTSDPLL SLFGSTSDND 
       310        320        330        340        350
LLQAATAMDS LTDLDLEQLL SESPEGSPFR DMDDGSDSLG VGLDQEFRQP 
       360        370        380        390        400
SSFPEGLPIP LEKRVKELAQ AARAAEGESK QKFFTQDING ILLDIEVQTR 
       410        420        430        440        450
ELTSQIRSGV FAYLASFLPC SKDALVKRAR KLHLYEQGGR LKEPLQKLKD 
       460        470        480        490        500
AIGRAMPEQV AKYQDECQAH TQAKVAKMLE EEKDKEQRER ICSDEEEDEE 
       510        520        530        540        550
KGGRRIMGPR KKFQWNDEIR ELLCQVVKIK LESRDLERNS KAQAWEDCVK 
       560        570        580        590        600
AFLDAEVKPL WPKGWMQART LFKESRRGHG HLTSLLAKKK VIAPSKIKMK 
       610        620        630        640        650
ESSVKLDKKV SVPSGQHGGP TTLLSEHQGG GLNTGANSRE HPSQATCGLT 
       660        670        680        690        700
DSVSVTLEDS LDEDLVRNPA SSVDAVSKEL ATLNSRAANS SEFTLPTPSK 
       710        720        730        740        750
APTEKVGGVL CTEEKRNFAK PSSSAPPPTN ALQSPLNFLA EQALALGQSS 
       760        770        780        790        800
QEKKPEGSGF KELSCQGPLS KGVPELHPSK AKHHNLPRTS HGPQAAAPVP 
       810        820        830        840        850
GPQVKVFHAG TQQQKSFTPP SPFVNKLQGP KATSPQCHRS LLQLVKTAAK 
       860        870        880        890        900
GQAFHATMPA SSGSSPASSS SAHKTTASNS TTISHPAKLH PTSSVGPSYK 
       910        920        930        940        950
NNPFAGSVSK HGASSSSPSP GGGAQVQSSV SGASLPGVQS PSAGQSASRA 
       960        970        980        990       1000
APSSAVKKTP VTQKLTLVAP PGGPNGDSGG GTQGVAKLLT SSLKPAAVSS 
      1010       1020       1030       1040       1050
VTSSTSLPKG TGGAVLLSNT SSLSLLSSSY KSNNPKLPGA MNSNSLGIIT 
      1060       1070       1080       1090       1100
QFPLHVLSFN ADSSAKAGVS KDAIVTGPAP GTFHHGLSHS LLAGLHSSPP 
      1110       1120       1130 
HTAPLPHAAV STHVPQSLPD ASQLHGKGPV VPRKL
Length:1,135
Mass (Da):122,336
Last modified:August 30, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8B5994B86F97E0F7
GO
Isoform 2 (identifier: Q4G0F8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1090-1120: SLLAGLHSSPPHTAPLPHAAVSTHVPQSLPD → N

Show »
Length:1,105
Mass (Da):119,333
Checksum:i153981FE96BCAB77
GO
Isoform 3 (identifier: Q4G0F8-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1091-1135: LLAGLHSSPP...GKGPVVPRKL → KFLSPASVPM...PDWSAGCLGL

Show »
Length:1,142
Mass (Da):123,416
Checksum:i0943B3C06580BF5A
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2R8VI01A0A2R8VI01_MOUSE
Ubinuclein-1
Ubn1
231Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence EDK97277 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti184K → N in BAB31587 (PubMed:16141072).Curated1
Sequence conflicti681A → G in BAC39106 (PubMed:16141072).Curated1
Sequence conflicti801G → A in BAC39106 (PubMed:16141072).Curated1
Sequence conflicti969A → P in BAC39106 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0369721090 – 1120SLLAG…QSLPD → N in isoform 2. 1 PublicationAdd BLAST31
Alternative sequenceiVSP_0369731091 – 1135LLAGL…VPRKL → KFLSPASVPMLCAMLGPVCV WCNHGNIPHLWKLHSTRDSC FVPDWSAGCLGL in isoform 3. 1 PublicationAdd BLAST45

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AK019173 mRNA Translation: BAB31587.1
AK020146 mRNA Translation: BAB32010.1
AK084046 mRNA Translation: BAC39106.1
AK137727 mRNA Translation: BAE23479.1
AK147571 mRNA Translation: BAE28001.1
CH466521 Genomic DNA Translation: EDK97277.1 Sequence problems.
BC060723 mRNA Translation: AAH60723.1
BC098372 mRNA Translation: AAH98372.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS27931.1 [Q4G0F8-1]
CCDS88873.1 [Q4G0F8-2]

NCBI Reference Sequences

More...RefSeqi		NP_080942.1, NM_026666.3 [Q4G0F8-1]
XP_006521879.1, XM_006521816.3 [Q4G0F8-1]
XP_006521880.1, XM_006521817.3 [Q4G0F8-1]
XP_006521882.1, XM_006521819.3
XP_017172375.1, XM_017316886.1 [Q4G0F8-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000052449; ENSMUSP00000061843; ENSMUSG00000039473 [Q4G0F8-1]
ENSMUST00000229126; ENSMUSP00000155263; ENSMUSG00000039473 [Q4G0F8-2]
ENSMUST00000230703; ENSMUSP00000155223; ENSMUSG00000039473 [Q4G0F8-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		170644

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:170644

UCSC genome browser

More...UCSCi		uc007ybq.1 mouse [Q4G0F8-1]
uc007ybr.1 mouse [Q4G0F8-2]
uc007ybs.1 mouse [Q4G0F8-3]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK019173 mRNA Translation: BAB31587.1
AK020146 mRNA Translation: BAB32010.1
AK084046 mRNA Translation: BAC39106.1
AK137727 mRNA Translation: BAE23479.1
AK147571 mRNA Translation: BAE28001.1
CH466521 Genomic DNA Translation: EDK97277.1 Sequence problems.
BC060723 mRNA Translation: AAH60723.1
BC098372 mRNA Translation: AAH98372.1
CCDSiCCDS27931.1 [Q4G0F8-1]
CCDS88873.1 [Q4G0F8-2]
RefSeqiNP_080942.1, NM_026666.3 [Q4G0F8-1]
XP_006521879.1, XM_006521816.3 [Q4G0F8-1]
XP_006521880.1, XM_006521817.3 [Q4G0F8-1]
XP_006521882.1, XM_006521819.3
XP_017172375.1, XM_017316886.1 [Q4G0F8-1]

3D structure databases

SMRiQ4G0F8
ModBaseiSearch...

Protein-protein interaction databases

BioGridi228360, 2 interactors
IntActiQ4G0F8, 1 interactor
MINTiQ4G0F8
STRINGi10090.ENSMUSP00000061843

PTM databases

iPTMnetiQ4G0F8
PhosphoSitePlusiQ4G0F8

Proteomic databases

PaxDbiQ4G0F8
PeptideAtlasiQ4G0F8
PRIDEiQ4G0F8

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		11234 140 antibodies

Genome annotation databases

EnsembliENSMUST00000052449; ENSMUSP00000061843; ENSMUSG00000039473 [Q4G0F8-1]
ENSMUST00000229126; ENSMUSP00000155263; ENSMUSG00000039473 [Q4G0F8-2]
ENSMUST00000230703; ENSMUSP00000155223; ENSMUSG00000039473 [Q4G0F8-1]
GeneIDi170644
KEGGimmu:170644
UCSCiuc007ybq.1 mouse [Q4G0F8-1]
uc007ybr.1 mouse [Q4G0F8-2]
uc007ybs.1 mouse [Q4G0F8-3]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		29855
MGIiMGI:1891307 Ubn1

Phylogenomic databases

eggNOGiENOG410KCZH Eukaryota
ENOG410XREY LUCA
GeneTreeiENSGT00940000158857
HOGENOMiCLU_007400_0_0_1
InParanoidiQ4G0F8
KOiK17492
OMAiKQRFFTQ
OrthoDBi469344at2759
PhylomeDBiQ4G0F8
TreeFamiTF326088

Enzyme and pathway databases

ReactomeiR-MMU-2559584 Formation of Senescence-Associated Heterochromatin Foci (SAHF)

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Ubn1 mouse

Protein Ontology

More...PROi		PR:Q4G0F8
RNActiQ4G0F8 protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000039473 Expressed in ear and 270 other tissues
ExpressionAtlasiQ4G0F8 baseline and differential
GenevisibleiQ4G0F8 MM

Family and domain databases

InterProiView protein in InterPro
IPR014840 HRD
IPR026936 Ubinuclein-1
IPR026947 UBN_middle_dom
PANTHERiPTHR21669:SF12 PTHR21669:SF12, 1 hit
PfamiView protein in Pfam
PF08729 HUN, 1 hit
PF14075 UBN_AB, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiUBN1_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q4G0F8
Secondary accession number(s): Q3UUZ4
, Q6P9K7, Q8BNC3, Q9CRM4, Q9CS40
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: August 30, 2005
Last modified: April 22, 2020
This is version 113 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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