UniProtKB - Q49XF6 (Q49XF6_STAS1)
Protein
Submitted name:
Putative transcriptional repressor of ribose operon
Gene
SSP1396
Organism
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
GO - Biological processi
- regulation of transcription, DNA-templated Source: InterPro
Keywordsi
Molecular function | DNA-bindingARBA annotation, RepressorARBA annotation |
Biological process | Transcription, Transcription regulationARBA annotation |
Enzyme and pathway databases
BioCyci | SSAP342451:G1G2H-1413-MONOMER |
Names & Taxonomyi
Protein namesi | Submitted name: Putative transcriptional repressor of ribose operonImported |
Gene namesi | Ordered Locus Names:SSP1396Imported |
Organismi | Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)Imported |
Taxonomic identifieri | 342451 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Staphylococcaceae › Staphylococcus › |
Proteomesi |
|
Structurei
3D structure databases
SMRi | Q49XF6 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q49XF6 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 2 – 56 | HTH lacI-typeInterPro annotationAdd BLAST | 55 |
Phylogenomic databases
eggNOGi | COG1609, Bacteria |
HOGENOMi | CLU_037628_6_1_9 |
OMAi | LCSNDRL |
OrthoDBi | 1796334at2 |
Family and domain databases
CDDi | cd01392, HTH_LacI, 1 hit |
Gene3Di | 1.10.260.40, 1 hit |
InterProi | View protein in InterPro IPR000843, HTH_LacI IPR010982, Lambda_DNA-bd_dom_sf IPR028082, Peripla_BP_I |
Pfami | View protein in Pfam PF00356, LacI, 1 hit |
SMARTi | View protein in SMART SM00354, HTH_LACI, 1 hit |
SUPFAMi | SSF47413, SSF47413, 1 hit SSF53822, SSF53822, 1 hit |
PROSITEi | View protein in PROSITE PS50932, HTH_LACI_2, 1 hit |
i Sequence
Sequence statusi: Complete.
Q49XF6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MATIKDVATL AGCSVATVSR AINNNGYVKA KTRLHIEEAI AELNYQPNEA
60 70 80 90 100
ARTLYKRKSK LIGLLLPDMS NPFFTLIARG VEDVALAHGY QVLIGNSDND
110 120 130 140 150
IKKAQGYLAT FVSHNCTGMI STAFNENIIE NTLTDHHIPF VFIDRINNEH
160 170 180 190 200
NGISTNHFKG GQLQAEVVRK GKGKNVLIVH ENLLIDAFHQ RVQGIKYILD
210 220 230 240 250
QQRIDYKMLE ATLLDNDKKF IDLIKELSID SIICSNDLLA INVLGIVQRY
260 270 280 290 300
HFKVPAEIQI IGYDNIPFSE MTYPQITTID QSAYHLGEIA VSQLLGLNTD
310 320
NLTNNHKQLA LTVKHRGSTR N
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008934 Genomic DNA Translation: BAE18541.1 |
RefSeqi | WP_011303170.1, NZ_MTGA01000038.1 |
Genome annotation databases
EnsemblBacteriai | BAE18541; BAE18541; SSP1396 |
GeneIDi | 3617124 |
KEGGi | ssp:SSP1396 |
PATRICi | fig|342451.11.peg.1398 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008934 Genomic DNA Translation: BAE18541.1 |
RefSeqi | WP_011303170.1, NZ_MTGA01000038.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
3E61 | X-ray | 2.00 | A/B | 54-320 | [»] | |
SMRi | Q49XF6 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 342451.SSP1396 |
Genome annotation databases
EnsemblBacteriai | BAE18541; BAE18541; SSP1396 |
GeneIDi | 3617124 |
KEGGi | ssp:SSP1396 |
PATRICi | fig|342451.11.peg.1398 |
Phylogenomic databases
eggNOGi | COG1609, Bacteria |
HOGENOMi | CLU_037628_6_1_9 |
OMAi | LCSNDRL |
OrthoDBi | 1796334at2 |
Enzyme and pathway databases
BioCyci | SSAP342451:G1G2H-1413-MONOMER |
Miscellaneous databases
EvolutionaryTracei | Q49XF6 |
Family and domain databases
CDDi | cd01392, HTH_LacI, 1 hit |
Gene3Di | 1.10.260.40, 1 hit |
InterProi | View protein in InterPro IPR000843, HTH_LacI IPR010982, Lambda_DNA-bd_dom_sf IPR028082, Peripla_BP_I |
Pfami | View protein in Pfam PF00356, LacI, 1 hit |
SMARTi | View protein in SMART SM00354, HTH_LACI, 1 hit |
SUPFAMi | SSF47413, SSF47413, 1 hit SSF53822, SSF53822, 1 hit |
PROSITEi | View protein in PROSITE PS50932, HTH_LACI_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q49XF6_STAS1 | |
Accessioni | Q49XF6Primary (citable) accession number: Q49XF6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | September 13, 2005 |
Last sequence update: | September 13, 2005 | |
Last modified: | December 2, 2020 | |
This is version 108 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |