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Protein
Submitted name:

At3g06170

Gene

At3g06170

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Enzyme and pathway databases

ReactomeiR-ATH-977347 Serine biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
At3g06170Imported
Submitted name:
Serinc-domain containing serine and sphingolipid biosynthesis proteinImported
Gene namesi
Ordered Locus Names:At3g06170Imported
ORF Names:F28L1.11Imported, F28L1_11Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G06170
TAIRilocus:2082415 AT3G06170

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei76 – 98HelicalSequence analysisAdd BLAST23
Transmembranei118 – 137HelicalSequence analysisAdd BLAST20
Transmembranei176 – 202HelicalSequence analysisAdd BLAST27
Transmembranei209 – 232HelicalSequence analysisAdd BLAST24
Transmembranei238 – 257HelicalSequence analysisAdd BLAST20
Transmembranei277 – 296HelicalSequence analysisAdd BLAST20
Transmembranei339 – 359HelicalSequence analysisAdd BLAST21
Transmembranei379 – 403HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

IntActiQ494Q0, 16 interactors
STRINGi3702.AT3G06170.1

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592 Eukaryota
ENOG410XP7K LUCA
HOGENOMiHOG000165463
OMAiVCFGMAM
OrthoDBiEOG09360CVY

Family and domain databases

InterProiView protein in InterPro
IPR005016 TDE1/TMS
PANTHERiPTHR10383 PTHR10383, 1 hit
PfamiView protein in Pfam
PF03348 Serinc, 1 hit

Sequencei

Sequence statusi: Complete.

Q494Q0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MACCLASCCA SATCGLCSSV ASGISRKSAR IAYCGLFGAS LVVSWILRET
60 70 80 90 100
GAPLLEKLPW INTSDSYTKE WYQQQAVLRV SFGNFLFFAI YALIMIGVKD
110 120 130 140 150
QNDRRDSWHH GGWGLKMIVW FLLVVLMFFV PNVIVSLYGT LSKFGAGAFL
160 170 180 190 200
LVQVVLLLDA THNWNDSWVE KDEKKWYIAL LVISIVCYIA TYTFSGILFI
210 220 230 240 250
WFNPSGQDCG LNVFFIVMPM ILAFVFAIIA LHPAVNGSLL PASVISVYCA
260 270 280 290 300
YVCYTGLSSE PHDYVCNGLN KSKAVNASTL ILGMLTTVLS VLYSALRAGS
310 320 330 340 350
STTFLSPPSS PRSGVKDALL GDPEDGKKSG EAEARPVSYS YSFFHIIFAL
360 370 380 390 400
ASMYAAMLLS GWTDSSESAT LIDVGWTSVW VKICTGWVTA GLYIWTLIAP

LILPDREFY
Length:409
Mass (Da):44,877
Last modified:September 13, 2005 - v1
Checksum:iBC7623885E1BC6C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT023726 mRNA Translation: AAZ23918.1
CP002686 Genomic DNA Translation: AEE74356.1
RefSeqiNP_187268.2, NM_111492.5
UniGeneiAt.47823

Genome annotation databases

EnsemblPlantsiAT3G06170.1; AT3G06170.1; AT3G06170
GeneIDi819791
GrameneiAT3G06170.1; AT3G06170.1; AT3G06170
KEGGiath:AT3G06170

Similar proteinsi

Entry informationi

Entry nameiQ494Q0_ARATH
AccessioniPrimary (citable) accession number: Q494Q0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: July 18, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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