Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative uncharacterized protein YkfC

Gene

ykfC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Could be the product of a pseudogene.Curated

Enzyme and pathway databases

BioCyciEcoCyc:G6133-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YkfC
Gene namesi
Name:ykfC
Ordered Locus Names:b0258, JW5813
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13341 ykfC

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001685481 – 376Putative uncharacterized protein YkfCAdd BLAST376

Proteomic databases

PRIDEiQ47688

Interactioni

Protein-protein interaction databases

BioGridi4262795, 116 interactors
STRINGi316407.85674402

Structurei

3D structure databases

ProteinModelPortaliQ47688
SMRiQ47688
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini67 – 332Reverse transcriptasePROSITE-ProRule annotationAdd BLAST266

Phylogenomic databases

eggNOGiENOG4105EKQ Bacteria
COG3344 LUCA
HOGENOMiHOG000000651
InParanoidiQ47688
OMAiQALWKLA
PhylomeDBiQ47688

Family and domain databases

InterProiView protein in InterPro
IPR000477 RT_dom
PfamiView protein in Pfam
PF00078 RVT_1, 1 hit
PROSITEiView protein in PROSITE
PS50878 RT_POL, 1 hit

Sequencei

Sequence statusi: Complete.

Q47688-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRKLATWAA TDPSLRIQRL LRLITQPEWL AEAARITLSS KGAHTPGVDG
60 70 80 90 100
VNKTMLQARL AVELQILRDE LLSGHYQPLP ARRVYIPKSN GKLRPLGIPA
110 120 130 140 150
LRDRIVQRAM LMAMEPIWES DFHTLSYGFR PERSVHHAIR TVKLQLTDCG
160 170 180 190 200
ETRGRWVIEG DLSSYFDTVH HRLLMKAVRR RISDARFMTL LWKTIKAGHI
210 220 230 240 250
DVGLFRAASE GVPQGGVISP LLSNIMLNEF DQYLHERYLS GKARKDRWYW
260 270 280 290 300
NNSIQRGRST AVRENWQWKP AVAYCRYADD FVLIVKGTKA QVEAIREECR
310 320 330 340 350
GVLEGSLKLR LNMDKTKIPH VNDGFIFLGH RLIRKRSRYG EMRVVSTIPQ
360 370
EKARNFAASL TALLWKVRIS GEILLG
Length:376
Mass (Da):43,165
Last modified:November 1, 1997 - v2
Checksum:i1F16921EC6B91083
GO

Sequence cautioni

The sequence BAA77927 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA Translation: AAB08678.1
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA Translation: BAA77927.2 Different initiation.
PIRiB64751

Genome annotation databases

EnsemblBacteriaiBAA77927; BAA77927; BAA77927
KEGGiecj:JW5813

Similar proteinsi

Entry informationi

Entry nameiYKFC_ECOLI
AccessioniPrimary (citable) accession number: Q47688
Secondary accession number(s): P77710
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 111 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health