UniProtKB - Q46905 (YGCO_ECOLI)
Protein
Ferredoxin-like protein YgcO
Gene
ygcO
Organism
Escherichia coli (strain K12)
Status
Functioni
Could be a 3Fe-4S cluster-containing protein. Probably participates in a redox process with YgcN, YgcQ and YgcR.
GO - Molecular functioni
- iron ion binding Source: InterPro
- iron-sulfur cluster binding Source: UniProtKB-KW
GO - Biological processi
- DNA mediated transformation Source: EcoCyc
- oxidation-reduction process Source: UniProtKB-KW
Keywordsi
Biological process | Electron transport, Transport |
Ligand | Iron, Iron-sulfur, Metal-binding |
Enzyme and pathway databases
BioCyci | EcoCyc:G7433-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Ferredoxin-like protein YgcO |
Gene namesi | Name:ygcO Ordered Locus Names:b2767, JW2737 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000159219 | 1 – 86 | Ferredoxin-like protein YgcOAdd BLAST | 86 |
Proteomic databases
PaxDbi | Q46905 |
PRIDEi | Q46905 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4262290, 25 interactors |
IntActi | Q46905, 4 interactors |
STRINGi | 511145.b2767 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 45 – 74 | 4Fe-4S ferredoxin-typePROSITE-ProRule annotationAdd BLAST | 30 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | COG2440, Bacteria |
HOGENOMi | CLU_163428_1_0_6 |
InParanoidi | Q46905 |
PhylomeDBi | Q46905 |
Family and domain databases
InterProi | View protein in InterPro IPR017896, 4Fe4S_Fe-S-bd IPR012206, Fd_FixX |
PANTHERi | PTHR43082, PTHR43082, 1 hit |
PIRSFi | PIRSF036548, Fdx_FixX, 1 hit |
PROSITEi | View protein in PROSITE PS51379, 4FE4S_FER_2, 1 hit |
i Sequence
Sequence statusi: Complete.
Q46905-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSVARNLWRV ADAPHIVPAD SVERQTAERL INACPAGLFS LTPEGNLRID
60 70 80
YRSCLECGTC RLLCDESTLQ QWRYPPSGFG ITYRFG
Sequence cautioni
The sequence AAA69277 differs from that shown. Reason: Erroneous initiation.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U29579 Genomic DNA Translation: AAA69277.1 Different initiation. U00096 Genomic DNA Translation: AAC75809.2 AP009048 Genomic DNA Translation: BAE76844.1 |
PIRi | C65058 |
RefSeqi | NP_417247.2, NC_000913.3 WP_000109529.1, NZ_LN832404.1 |
Genome annotation databases
EnsemblBacteriai | AAC75809; AAC75809; b2767 BAE76844; BAE76844; BAE76844 |
GeneIDi | 945120 |
KEGGi | ecj:JW2737 eco:b2767 |
PATRICi | fig|1411691.4.peg.3970 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U29579 Genomic DNA Translation: AAA69277.1 Different initiation. U00096 Genomic DNA Translation: AAC75809.2 AP009048 Genomic DNA Translation: BAE76844.1 |
PIRi | C65058 |
RefSeqi | NP_417247.2, NC_000913.3 WP_000109529.1, NZ_LN832404.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4262290, 25 interactors |
IntActi | Q46905, 4 interactors |
STRINGi | 511145.b2767 |
Proteomic databases
PaxDbi | Q46905 |
PRIDEi | Q46905 |
Genome annotation databases
EnsemblBacteriai | AAC75809; AAC75809; b2767 BAE76844; BAE76844; BAE76844 |
GeneIDi | 945120 |
KEGGi | ecj:JW2737 eco:b2767 |
PATRICi | fig|1411691.4.peg.3970 |
Organism-specific databases
EchoBASEi | EB2923 |
Phylogenomic databases
eggNOGi | COG2440, Bacteria |
HOGENOMi | CLU_163428_1_0_6 |
InParanoidi | Q46905 |
PhylomeDBi | Q46905 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7433-MONOMER |
Miscellaneous databases
PROi | PR:Q46905 |
Family and domain databases
InterProi | View protein in InterPro IPR017896, 4Fe4S_Fe-S-bd IPR012206, Fd_FixX |
PANTHERi | PTHR43082, PTHR43082, 1 hit |
PIRSFi | PIRSF036548, Fdx_FixX, 1 hit |
PROSITEi | View protein in PROSITE PS51379, 4FE4S_FER_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YGCO_ECOLI | |
Accessioni | Q46905Primary (citable) accession number: Q46905 Secondary accession number(s): Q2MA62 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | November 13, 2007 | |
Last modified: | October 7, 2020 | |
This is version 116 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families