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Entry version 99 (31 Jul 2019)
Sequence version 1 (01 Nov 1996)
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Protein
Submitted name:

Alpha-amylase-pullulanase

Gene
N/A
Organism
Bacillus sp. XAL601
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
CBM20 Carbohydrate-Binding Module Family 20
CBM34 Carbohydrate-Binding Module Family 34
CBM48 Carbohydrate-Binding Module Family 48
GH13 Glycoside Hydrolase Family 13

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Alpha-amylase-pullulanaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus sp. XAL601Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri460016 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1037 – 1125Fibronectin type-IIIInterPro annotationAdd BLAST89
Domaini1330 – 1427CBM20InterPro annotationAdd BLAST98
Domaini1840 – 1903SLHInterPro annotationAdd BLAST64
Domaini1904 – 1965SLHInterPro annotationAdd BLAST62
Domaini1973 – 2032SLHInterPro annotationAdd BLAST60

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1551 – 1631DisorderedSequence analysisAdd BLAST81

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1552 – 1628PolarSequence analysisAdd BLAST77

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Family and domain databases

Conserved Domains Database

More...
CDDi
cd02857 E_set_CDase_PDE_N, 1 hit
cd00063 FN3, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 7 hits
2.60.40.1180, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR031319 A-amylase_C
IPR032640 AMPK1_CBM
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR006047 Glyco_hydro_13_cat_dom
IPR004185 Glyco_hydro_13_lg-like_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR001119 SLH_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02903 Alpha-amylase_N, 1 hit
PF16561 AMPK1_CBM, 1 hit
PF00395 SLH, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00642 Aamy, 1 hit
SM00632 Aamy_C, 1 hit
SM01065 CBM_2, 2 hits
SM00060 FN3, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49265 SSF49265, 1 hit
SSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51166 CBM20, 1 hit
PS50853 FN3, 1 hit
PS51272 SLH, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q45643-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVKGRWRKYV AYFSIFLLFA QLFSFSAIVR ANEPMQSPVV NGNDVTFRYV
60 70 80 90 100
GTGEEQSVLL AGSFNDWQTI ELTKESDYIW SVTKTLPDGT YMYKFVVDGN
110 120 130 140 150
WVADPLNANQ ADDGHGGKNS VVVVGQPAQQ QERVVTLVGN LQKELGHEKE
160 170 180 190 200
WDPTATATVM KHEGNGLYTF TGTLPAGTYE YKIAINGSWD ENYGAGGRNG
210 220 230 240 250
GNISFTLEKE TEVTFYYHDS THAIADSTWY TPIPKEKQPR LVGTILPAIG
260 270 280 290 300
YEKEVDGWTP ETSTAFFTDD DFDSVYTFSA RVPKGTYEYK VVLGNSWDEN
310 320 330 340 350
YPQDNNAKLN VLEETTITFF FNAKTKELYT DYSPTGSDGN VDKDRLKHNT
360 370 380 390 400
WDSLYRQPFG AVKAGTEVTL RLAAKKGDVT KANVYVKNTT TGTAKLYEMS
410 420 430 440 450
KVGVIGDDEY WEATFTPEEK GLYGYKFIAM DGAAKAEYGE DTQEGQWGRA
460 470 480 490 500
VDKNAELFQL TVYDPNYKTP DWMKQAVVYQ IFPDRFFNGN PNNDKVKEYG
510 520 530 540 550
RGNEPIEYRE WSQLPDNPRM KDTPGYDGDG FWNNDFFGGD IAGIEQKLDY
560 570 580 590 600
LQSLGVNTIY LNPIAHAPSS HKYDAQDFKE IDPMFGTPEE FESFVQAIAS
610 620 630 640 650
RGMHLILDGV FNHVSDDSIY FDRYGKYPTV GAYEYWSAVY DLMNEKGLSE
660 670 680 690 700
EQARAQVEQK FKDEGQQFSP YGFHLWFNIE NEKVNGVYKY QSWWGFDSLP
710 720 730 740 750
EFKSVTGTKV PYPSELNNEQ LANYIFYERD SVAKSWITRG ASGWRLDVAN
760 770 780 790 800
EVDTEFWREF RKELLQSDYD RGPTLKNGQQ PLILGEIWDD ASKYFLGDQY
810 820 830 840 850
DSVMNYRFRG AVLDFLRNGK AEEIDARLTA VREDYPEEAF YALMNLIGSH
860 870 880 890 900
DTARAIFLLG NGTDSYERAE LDPNYNEQLG KQRSKVAVIF QMGYPGAPTI
910 920 930 940 950
YYGDEAGVTG SKDPDNRRTY PWGSEDKELI AHYQKVGKIR TKHQDVLAKG
960 970 980 990 1000
TIETVYAKGD VYVFARQYGK DVALIAMNRG DSAQTVQLDV SSIIPNGTSF
1010 1020 1030 1040 1050
VDELHGEYEV TVSDGKVQLN IPALDGRMLF GKVTVNMPNE VTNVQATAGV
1060 1070 1080 1090 1100
GQVTLAWEGD ASTYRIYQST LKGAGYELVK ETNEKTAVID NLKNGTAYYF
1110 1120 1130 1140 1150
AITAVDENGN ESAKVETNRV VPHYPLAEEH VALLSEVNGG VLDLAALITV
1160 1170 1180 1190 1200
EAKVQIDNVT KHGLADGLQA VLQVKKPNSD KWEDIQATYD RQDGDANVFR
1210 1220 1230 1240 1250
ASFTPLQAGT YTYRYGFTTN LGDSWVYTEE KTFTLTANEA DQQAPAKGIH
1260 1270 1280 1290 1300
LLQPDVESGQ VNLSWSFIER DDHDAYMVVI ERDGQVIHTT TTISTSFTDY
1310 1320 1330 1340 1350
DVENGKTYTY VVKLYDRAGN VVASKDVQIT PDIVMVQVTF KVKAPSYTPL
1360 1370 1380 1390 1400
DTRITIPNSI NGWNTGAWEM TRGGAVTPDW EFTTELQEGE TITYKYVKGG
1410 1420 1430 1440 1450
SWDQEGLADH TRDDQTDDDV SYYGYGAIGT ELKVTVHNQG NNKMVIQDYI
1460 1470 1480 1490 1500
LRWIDMPVVV EDVTKDGDRV TIKGNAIKDG VLTINKERVT IQDDMSFTYT
1510 1520 1530 1540 1550
FTPAANQKEI AIHIEPSERS KSDIFKNDGG AIAKNTKDYV LNLDTKQLRE
1560 1570 1580 1590 1600
GVLQEDTGSG TTPGSGTTPG SGTTPGSGTT PGSGTTPGSG TTPGSGTTPG
1610 1620 1630 1640 1650
SGTTPGSGTT PGSGTTPGSG TTPGSGTTPE KGAVVLQPQV ETKEKDGKIV
1660 1670 1680 1690 1700
EKVATISSNE VTSIVNSLSN ENKQVVVSLG SLAKGVTTKV DVPATLFTQA
1710 1720 1730 1740 1750
ANKQGEATIV SATEQATYKL PAKEVQASLA AIAKTLGATV EQVNISIEMR
1760 1770 1780 1790 1800
VKDAPQLRAK ALSDAVEFHV VAKANGKEQV IDRFTQYVER EIVLKQAVNA
1810 1820 1830 1840 1850
SRSIVVRVND DGSITPVPTT FVGNKAVIKS LTNSTYVVVE GTHTFSDIEK
1860 1870 1880 1890 1900
HWAKGYIETL AAKQLVKGMT ETAYRPNEQM TRAQFAVLLV RALALPHETY
1910 1920 1930 1940 1950
DGRFADVKGT EWFNKNGELA AAVKLGIIQG KTANTFAPNE PITRVQAAVM
1960 1970 1980 1990 2000
IERALKLSFV GYDEATNDKT KKATDFRDAK QLPTWAKQAI EAVYQAGIMQ
2010 2020 2030
GRDNGSFDPT GHMTRAEMAK VLAEFLGKVK LM
Length:2,032
Mass (Da):225,004
Last modified:November 1, 1996 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7BD93680F1EB4A38
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
D28467 Genomic DNA Translation: BAA05832.1

Protein sequence database of the Protein Information Resource

More...
PIRi
I39917

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D28467 Genomic DNA Translation: BAA05832.1
PIRiI39917

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein family/group databases

CAZyiCBM20 Carbohydrate-Binding Module Family 20
CBM34 Carbohydrate-Binding Module Family 34
CBM48 Carbohydrate-Binding Module Family 48
GH13 Glycoside Hydrolase Family 13

Family and domain databases

CDDicd02857 E_set_CDase_PDE_N, 1 hit
cd00063 FN3, 1 hit
Gene3Di2.60.40.10, 7 hits
2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR031319 A-amylase_C
IPR032640 AMPK1_CBM
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR006047 Glyco_hydro_13_cat_dom
IPR004185 Glyco_hydro_13_lg-like_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR001119 SLH_dom
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02903 Alpha-amylase_N, 1 hit
PF16561 AMPK1_CBM, 1 hit
PF00395 SLH, 3 hits
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00632 Aamy_C, 1 hit
SM01065 CBM_2, 2 hits
SM00060 FN3, 2 hits
SUPFAMiSSF49265 SSF49265, 1 hit
SSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit
PROSITEiView protein in PROSITE
PS51166 CBM20, 1 hit
PS50853 FN3, 1 hit
PS51272 SLH, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ45643_9BACI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q45643
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 31, 2019
This is version 99 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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