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Protein

HTH-type transcriptional regulator SoxR

Gene

soxR

Organism
Arthrobacter sp. (strain TE1826)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Transcriptional repressor of soxA gene expression.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator SoxR
Gene namesi
Name:soxR
OrganismiArthrobacter sp. (strain TE1826)
Taxonomic identifieri68999 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001057511 – 289HTH-type transcriptional regulator SoxRAdd BLAST289

Proteomic databases

PRIDEiQ44311

Structurei

3D structure databases

ProteinModelPortaliQ44311
SMRiQ44311
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

Q44311-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIKDLQIFQ KVVEYGSVSK AAKSLNYVQS YVTVRIQKLE EELQTELFHR
60 70 80 90 100
SSRGMVLNSE GKTLLFYSQN IISMVDEMIK VVQDCDNPAG SLEIGTVETV
110 120 130 140 150
NKLPSILSAY HKKYPKIDLS LITGVTEDLV DDVLNYKLDG AFVTGYYNHP
160 170 180 190 200
QIIQYEVFEE ELVLISNYDK LPFEELKNKP LLVFKQGCSY RAKLEGWVRD
210 220 230 240 250
EGEINAKIME FGTMETILGS VIAGLGITII PKSTISLLEA EGVVRIYEIP
260 270 280
EKYSKITTVF IHRADTFLTN ALQKFIETIK NAPETARKL
Length:289
Mass (Da):32,765
Last modified:November 1, 1996 - v1
Checksum:i66022694F7290E9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63413 Genomic DNA Translation: BAA09717.1

Similar proteinsi

Entry informationi

Entry nameiSOXR_ARTST
AccessioniPrimary (citable) accession number: Q44311
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

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