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Protein

Aquaporin NIP1-1

Gene

NIP1-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Aquaporin NIP1-1
Alternative name(s):
NOD26-like intrinsic protein 1-1
OsNIP1;1
Gene namesi
Name:NIP1-1
Synonyms:rMIP1, YK347
Ordered Locus Names:Os02g0232900, LOC_Os02g13870
ORF Names:OJ1705_E12.32
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei50 – 70Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei78 – 98Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei129 – 149Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei166 – 186Helical; Name=4Sequence analysisAdd BLAST21
Transmembranei194 – 214Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei236 – 256Helical; Name=6Sequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002860261 – 284Aquaporin NIP1-1Add BLAST284

Proteomic databases

PaxDbiQ40746
PRIDEiQ40746

Expressioni

Tissue specificityi

Expressed in leaves and at lower levels in roots and anthers.2 Publications

Inductioni

By abscisic acid (ABA).1 Publication

Gene expression databases

ExpressionAtlasiQ40746 differential
GenevisibleiQ40746 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g13870.1

Structurei

3D structure databases

ProteinModelPortaliQ40746
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi107 – 109NPA 13
Motifi219 – 221NPA 23

Domaini

Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0223 Eukaryota
COG0580 LUCA
HOGENOMiHOG000288286
InParanoidiQ40746
KOiK09874
OMAiQVVATMF
OrthoDBiEOG09360N7X

Family and domain databases

CDDicd00333 MIP, 1 hit
Gene3Di1.20.1080.10, 1 hit
InterProiView protein in InterPro
IPR023271 Aquaporin-like
IPR034294 Aquaporin_transptr
IPR000425 MIP
IPR022357 MIP_CS
PANTHERiPTHR19139 PTHR19139, 1 hit
PfamiView protein in Pfam
PF00230 MIP, 1 hit
PRINTSiPR00783 MINTRINSICP
SUPFAMiSSF81338 SSF81338, 1 hit
TIGRFAMsiTIGR00861 MIP, 1 hit
PROSITEiView protein in PROSITE
PS00221 MIP, 1 hit

Sequencei

Sequence statusi: Complete.

Q40746-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGDNNSQT TNGGSGHEQR AMEEGRKQEE FAADGQGCGL AFSVPFIQKI
60 70 80 90 100
IAEIFGTYFL IFAGCGAVTI NQSKNGQITF PGVAIVWGLA VMVMVYAVGH
110 120 130 140 150
ISGAHFNPAV TLAFATCRRF PWRQVPAYAA AQMLGATLAA GTLRLMFGGR
160 170 180 190 200
HEHFPGTLPA GSDVQSLVLE FIITFYLMFV ISGVATDNRA IGELAGLAVG
210 220 230 240 250
ATILLNVLIA GPISGASMNP ARSLGPAMIG GEYRSIWVYI VGPVAGAVAG
260 270 280
AWAYNIIRFT NKPLREITKS GSFLKSMNRM NSST
Length:284
Mass (Da):29,973
Last modified:November 1, 1996 - v1
Checksum:i37963A9DF3E6C220
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17443 mRNA Translation: BAA04257.1
AP004070 Genomic DNA Translation: BAD27715.1
AP008208 Genomic DNA Translation: BAF08289.1
AP014958 Genomic DNA Translation: BAS77793.1
AK068806 mRNA No translation available.
PIRiS52003
RefSeqiXP_015623151.1, XM_015767665.1
UniGeneiOs.2678

Genome annotation databases

EnsemblPlantsiOs02t0232900-01; Os02t0232900-01; Os02g0232900
GeneIDi4328814
GrameneiOs02t0232900-01; Os02t0232900-01; Os02g0232900
KEGGiosa:4328814

Similar proteinsi

Entry informationi

Entry nameiNIP11_ORYSJ
AccessioniPrimary (citable) accession number: Q40746
Secondary accession number(s): Q6EUF4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

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