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Protein

Ras-related protein Rab11D

Gene

RAB11D

Organism
Nicotiana tabacum (Common tobacco)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi22 – 29GTPBy similarity8
Nucleotide bindingi70 – 74GTPBy similarity5
Nucleotide bindingi128 – 131GTPBy similarity4

GO - Molecular functioni

Keywordsi

LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein Rab11D
Gene namesi
Name:RAB11D
OrganismiNicotiana tabacum (Common tobacco)
Taxonomic identifieri4097 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana
Proteomesi
  • UP000084051 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001211781 – 222Ras-related protein Rab11DAdd BLAST222

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi219S-geranylgeranyl cysteineBy similarity1
Lipidationi220S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PRIDEiQ40522

Structurei

3D structure databases

ProteinModelPortaliQ40522
SMRiQ40522
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi44 – 52Effector regionSequence analysis9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

KOiK07904

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Q40522-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASGYGDASQ KIDYVFKVVL IGDSAVGKSQ ILARFARNEF SLDSKATIGV
60 70 80 90 100
EFQTRTLAIQ HKSVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDITKR
110 120 130 140 150
QTFDHIPRWL EELRAHADRN IVIMLIGNKT DLEDQRAVPT EDAKEFAQKE
160 170 180 190 200
GLFFLETSAM EATNLEDAFL TVLTEIFNIV NKKNLAADDN QSNGNPASLT
210 220
GKKILVPGPG QVIPEKKACC SS
Length:222
Mass (Da):24,536
Last modified:November 1, 1996 - v1
Checksum:iD6A5EF2EFA1C21D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L29270 mRNA Translation: AAA74114.1
PIRiT03622
RefSeqiNP_001311834.1, NM_001324905.1
UniGeneiNta.3507

Genome annotation databases

GeneIDi107766135
KEGGinta:107766135

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L29270 mRNA Translation: AAA74114.1
PIRiT03622
RefSeqiNP_001311834.1, NM_001324905.1
UniGeneiNta.3507

3D structure databases

ProteinModelPortaliQ40522
SMRiQ40522
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ40522

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi107766135
KEGGinta:107766135

Phylogenomic databases

KOiK07904

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRB11D_TOBAC
AccessioniPrimary (citable) accession number: Q40522
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: October 25, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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