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Protein

Pathogenesis-related protein PR-1

Gene

PR-1

Organism
Medicago truncatula (Barrel medic) (Medicago tribuloides)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probably involved in the defense reaction of plants against pathogens.

GO - Biological processi

Keywordsi

Molecular functionPathogenesis-related protein
Biological processPlant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Pathogenesis-related protein PR-1
Gene namesi
Name:PR-1
OrganismiMedicago truncatula (Barrel medic) (Medicago tribuloides)
Taxonomic identifieri3880 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideae50 kb inversion cladeNPAAA cladeHologaleginaIRL cladeTrifolieaeMedicago

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000000631224 – 173Pathogenesis-related protein PR-1Add BLAST150

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi78 ↔ 149By similarity
Disulfide bondi122 ↔ 128By similarity
Disulfide bondi144 ↔ 159By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiQ40374

Expressioni

Gene expression databases

ExpressionAtlasiQ40374 differential

Structurei

3D structure databases

ProteinModelPortaliQ40374
SMRiQ40374
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 161SCPAdd BLAST117

Sequence similaritiesi

Belongs to the CRISP family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

OMAiSTERIGC
OrthoDBiEOG09360NFY

Family and domain databases

CDDicd05381 SCP_PR-1_like, 1 hit
Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR018244 Allrgn_V5/Tpx1_CS
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR034111 SCP_PR1-like
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit
PROSITEiView protein in PROSITE
PS01009 CRISP_1, 1 hit
PS01010 CRISP_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q40374-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSFRCFSFAL FLLLLTFISH VSASYIPNKK SFKSRSFKNQ FLIPQNIARA
60 70 80 90 100
AVGLRPLVWD DKLTHYAQWY ANQRRNDCAL EHSNGPYGEN IFWGSGVGWN
110 120 130 140 150
PAQAVSAWVD EKQFYNYWHN SCVDGEMCGH YTQVVWGSTT KVGCASVVCS
160 170
DDKGTFMTCN YDPPGNYYGE RPY
Length:173
Mass (Da):19,760
Last modified:November 1, 1996 - v1
Checksum:i898B00C9CD72DE4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79778 mRNA Translation: CAA56174.1
PIRiS47171
RefSeqiXP_003610169.1, XM_003610121.2
UniGeneiMtr.844

Genome annotation databases

EnsemblPlantsiAES92366; AES92366; MTR_4g128750
GeneIDi11441780
GrameneiAES92366; AES92366; MTR_4g128750
KEGGimtr:MTR_4g128750

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79778 mRNA Translation: CAA56174.1
PIRiS47171
RefSeqiXP_003610169.1, XM_003610121.2
UniGeneiMtr.844

3D structure databases

ProteinModelPortaliQ40374
SMRiQ40374
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ40374

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAES92366; AES92366; MTR_4g128750
GeneIDi11441780
GrameneiAES92366; AES92366; MTR_4g128750
KEGGimtr:MTR_4g128750

Phylogenomic databases

OMAiSTERIGC
OrthoDBiEOG09360NFY

Gene expression databases

ExpressionAtlasiQ40374 differential

Family and domain databases

CDDicd05381 SCP_PR-1_like, 1 hit
Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR018244 Allrgn_V5/Tpx1_CS
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR034111 SCP_PR1-like
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit
PROSITEiView protein in PROSITE
PS01009 CRISP_1, 1 hit
PS01010 CRISP_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiPR1_MEDTR
AccessioniPrimary (citable) accession number: Q40374
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: September 12, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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