UniProtKB - Q3YTF2 (Q3YTF2_SHISS)
Protein
Submitted name:
TraD protein
Gene
traD
Organism
Shigella sonnei (strain Ss046)
Status
Functioni
GO - Biological processi
- conjugation Source: InterPro
Enzyme and pathway databases
BioCyci | SSON300269:G1GL2-5777-MONOMER |
Names & Taxonomyi
Protein namesi | Submitted name: TraD proteinImported |
Gene namesi | Name:traDImported Ordered Locus Names:SSON_P190Imported |
Encoded oni | Plasmid pSS_046Imported |
Organismi | Shigella sonnei (strain Ss046)Imported |
Taxonomic identifieri | 300269 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Shigella › |
Proteomesi |
|
Subcellular locationi
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 6 – 27 | HelicalSequence analysisAdd BLAST | 22 | |
Transmembranei | 88 – 114 | HelicalSequence analysisAdd BLAST | 27 |
GO - Cellular componenti
- integral component of membrane Source: UniProtKB-KW
Keywords - Cellular componenti
MembraneFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 11 – 108 | TraD_NInterPro annotationAdd BLAST | 98 | |
Domaini | 152 – 540 | TrwB_AAD_bindInterPro annotationAdd BLAST | 389 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 592 – 685 | DisorderedSequence analysisAdd BLAST | 94 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 607 – 639 | Pro-richSequence analysisAdd BLAST | 33 |
Keywords - Domaini
Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
HOGENOMi | CLU_016763_2_0_6 |
OMAi | ILWVKIS |
Family and domain databases
CDDi | cd01127, TrwB, 1 hit |
InterProi | View protein in InterPro IPR027417, P-loop_NTPase IPR014128, T4SS_TraD IPR019476, T4SS_TraD_DNA-bd IPR022585, TraD_N |
Pfami | View protein in Pfam PF12615, TraD_N, 1 hit PF10412, TrwB_AAD_bind, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR02759, TraD_Ftype, 1 hit |
i Sequence
Sequence statusi: Complete.
Q3YTF2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MFSQIANIML YCLFIFFWIL VGLVLWVKIS WQTFVNGCIY WWCTTLEGMR
60 70 80 90 100
DLIKSQPVYE IQYYGKTFRM NAAQVLHDKY MIWCGEQLWS AFVLATVVAL
110 120 130 140 150
VICLITFFVV SWILGRQGKQ QSENEVTGGR QLTDNPKDVA RMLKKDGRDS
160 170 180 190 200
DIRIGDLPII RDSEIQNFCL HGTVGAGKSE VIRRLANYAR QRGDMVVIYD
210 220 230 240 250
RSGEFVKSYY DPSIDKILNP LDARCAAWDL WKECLTQPDF DNTANTLIPM
260 270 280 290 300
GTKEDPFWQG SGRTIFAEAA YLMRNDPNRS YSKLVDTLLS IKIEKLRTYL
310 320 330 340 350
RNSPAANLVE EKIEKTAISI RAVLTNYVKA IRYLQGIEHN GEPFTIRDWM
360 370 380 390 400
RGVREDQKNG WLFISSNADT HASLKPVISM WLSIAIRGLL AMGENRNRRV
410 420 430 440 450
WFFCDELPTL HKLPDLVEIL PEARKFGGCY VFGIQSYAQL EDIYGEKAAA
460 470 480 490 500
TLFDVMNTRA FFRSPSHKIA EFAVGEIGEK EHLKASEQYS YGADPVRDGV
510 520 530 540 550
STGKDMERQT LVSYSDIQSL PDLTCYVTLP GPYPAVKLSL KYQERPKVAP
560 570 580 590 600
EFIPRDINPE MENRLSAVLA AREAEGRQMA SLFEPDVPEV VSGEDVTQAE
610 620 630 640 650
QPQQPQQPQQ PQQPQQPQQP QQPQQPQQPQ QPQQPQQPQQ PVSPVINDKK
660 670 680 690 700
SDSGVNVPAG GIEQELKMKP EEEMEQQLPP GISESGEVVD MAAYEAWQQE
710 720 730
NHPDTWQQMQ RREEVNINVH RERGEDVEPG DDF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000039 Genomic DNA Translation: AAZ91210.1 |
Genome annotation databases
EnsemblBacteriai | AAZ91210; AAZ91210; SSON_P190 |
KEGGi | ssn:SSON_P190 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000039 Genomic DNA Translation: AAZ91210.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblBacteriai | AAZ91210; AAZ91210; SSON_P190 |
KEGGi | ssn:SSON_P190 |
Phylogenomic databases
HOGENOMi | CLU_016763_2_0_6 |
OMAi | ILWVKIS |
Enzyme and pathway databases
BioCyci | SSON300269:G1GL2-5777-MONOMER |
Family and domain databases
CDDi | cd01127, TrwB, 1 hit |
InterProi | View protein in InterPro IPR027417, P-loop_NTPase IPR014128, T4SS_TraD IPR019476, T4SS_TraD_DNA-bd IPR022585, TraD_N |
Pfami | View protein in Pfam PF12615, TraD_N, 1 hit PF10412, TrwB_AAD_bind, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR02759, TraD_Ftype, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q3YTF2_SHISS | |
Accessioni | Q3YTF2Primary (citable) accession number: Q3YTF2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | September 27, 2005 |
Last sequence update: | September 27, 2005 | |
Last modified: | December 2, 2020 | |
This is version 81 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |