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Entry version 102 (07 Oct 2020)
Sequence version 2 (27 Jul 2011)
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Protein

Xyloside xylosyltransferase 1

Gene

Xxylt1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Alpha-1,3-xylosyltransferase, which elongates the O-linked xylose-glucose disaccharide attached to EGF-like repeats in the extracellular domain of target proteins by catalyzing the addition of the second xylose. Known targets include Notch proteins and coagulation factors, such as F9.1 Publication

Caution

It is uncertain whether Met-1 or Met-14 is the initiator.Curated

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Mg2+By similarity, Mn2+1 PublicationNote: Has the highest in vitro activity with 20 mM Mn2+, a concentration entirely out of the physiological range. Can also utilize Mg2+, suggesting this may be the physiological cofactor.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi225ManganeseCombined sources1 Publication1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei226UDP-alpha-D-xylose; via amide nitrogenCombined sources1 Publication1
Metal bindingi227ManganeseCombined sources1 Publication1
Binding sitei289UDP-alpha-D-xyloseCombined sources1 Publication1
Binding sitei327UDP-alpha-D-xylose; via carbonyl oxygenCombined sources1 Publication1
Binding sitei330Substrate glycopeptideCombined sources1 Publication1
Binding sitei330UDP-alpha-D-xyloseCombined sources1 Publication1
Binding sitei359Substrate glycopeptideCombined sources1 Publication1
Metal bindingi382ManganeseCombined sources1 Publication1
Binding sitei384Substrate glycopeptideCombined sources1 Publication1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferase, Transferase
LigandMagnesium, Manganese, Metal-binding

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
GT8, Glycosyltransferase Family 8

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Xyloside xylosyltransferase 1 (EC:2.4.2.621 Publication)
Alternative name(s):
UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Xxylt1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2146443, Xxylt1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 19Cytoplasmic1 PublicationAdd BLAST19
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei20 – 42Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST23
Topological domaini43 – 392Lumenal1 PublicationAdd BLAST350

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi225D → N: No effect on enzyme activity. 1 Publication1
Mutagenesisi255E → A: Abolishes enzyme activity. 1 Publication1
Mutagenesisi257Q → A: Reduces enzyme activity. 1 Publication1
Mutagenesisi262H → A: Reduces enzyme activity. 1 Publication1
Mutagenesisi265W → A: Slighly reduces enzyme activity. 1 Publication1
Mutagenesisi266Q → K: No effect on enzyme activity. 1 Publication1
Mutagenesisi289S → A: Slighly reduces enzyme activity. 1 Publication1
Mutagenesisi319D → N: No significant effect on enzyme activity. 1 Publication1
Mutagenesisi324R → S: Reduces enzyme activity. 1 Publication1
Mutagenesisi325G → S: Strongly reduces enzyme activity. 1 Publication1
Mutagenesisi326H → A: Abolishes enzyme activity. 1 Publication1
Mutagenesisi329D → A: Increases enzyme activity. 1 Publication1
Mutagenesisi330Q → A: Abolishes enzyme activity. 1 Publication1
Mutagenesisi358W → A: Abolishes enzyme activity. 1 Publication1
Mutagenesisi359W → A: Abolishes enzyme activity. 1 Publication1
Mutagenesisi384N → A: Abolishes enzyme activity. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002344281 – 392Xyloside xylosyltransferase 1Add BLAST392

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi349 ↔ 374Combined sources
Disulfide bondi356 ↔ 385Combined sources

Keywords - PTMi

Disulfide bond

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q3U4G3

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q3U4G3

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q3U4G3

PeptideAtlas

More...
PeptideAtlasi
Q3U4G3

PRoteomics IDEntifications database

More...
PRIDEi
Q3U4G3

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q3U4G3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q3U4G3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000047434, Expressed in embryonic post-anal tail and 161 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q3U4G3, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer (PubMed:26414444). Dimer formation may be essential for the retention in endoplasmic reticulum (Probable).

Curated1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
234571, 1 interactor

Database of interacting proteins

More...
DIPi
DIP-61862N

Protein interaction database and analysis system

More...
IntActi
Q3U4G3, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000050246

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q3U4G3, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1392
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q3U4G3

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni103 – 105UDP-alpha-D-xylose bindingCombined sources1 Publication3
Regioni262 – 265Interaction with target proteins1 Publication4

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyltransferase 8 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3765, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000158154

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_048175_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q3U4G3

KEGG Orthology (KO)

More...
KOi
K23800

Identification of Orthologs from Complete Genome Data

More...
OMAi
YSLACGW

Database of Orthologous Groups

More...
OrthoDBi
830935at2759

TreeFam database of animal gene trees

More...
TreeFami
TF323210

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.90.550.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002495, Glyco_trans_8
IPR029044, Nucleotide-diphossugar_trans
IPR042465, XXLT1

The PANTHER Classification System

More...
PANTHERi
PTHR46612, PTHR46612, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01501, Glyco_transf_8, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53448, SSF53448, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q3U4G3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGLLRGGAAC ARAMARLGAL RSHYCALLLA AALAVCAFYY LGSGRETFSS
60 70 80 90 100
ATKRLKEARA GAAAPTPPAP ELARGSAAPA SGAKAKSLEG GVVVPVDYHL
110 120 130 140 150
LMMFTKAEHN APLQAKARVA LSSLLRLAKF EAHEVLNLHF VSEEASREVA
160 170 180 190 200
KALLRELLPP AAGFKCKVIF HDVAVLTDKL FPVVEAMQKY FSAGSGTYYS
210 220 230 240 250
DSIFFLSVAM HQIMPKEIPR IIQLDLDLKY KTNIRELFEE FDNFLPGAVI
260 270 280 290 300
GIAREMQPVY RHTFWQFRHE NPKTRVGDPP PEGLPGFNSG VMLLNLEAMR
310 320 330 340 350
QSPLYSHLLE PSWVQQLADK YHFRGHLGDQ DFFTMIGMEH PELFHVLDCT
360 370 380 390
WNRQLCTWWR DHGYSDVFQA YFRCEGHVKI YHGNCNTPIP ED
Length:392
Mass (Da):43,839
Last modified:July 27, 2011 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i0916EB1D7E27F08E
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH31419 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti46 – 47ET → LP in AAH31419 (PubMed:15489334).Curated2
Sequence conflicti80 – 81AS → GF in BAE32468 (PubMed:16141072).Curated2
Sequence conflicti80 – 81AS → GF in AAH31419 (PubMed:15489334).Curated2
Sequence conflicti100L → Q in BAE38667 (PubMed:16141072).Curated1
Sequence conflicti110N → D in BAE38667 (PubMed:16141072).Curated1
Sequence conflicti312S → A in BAE38667 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK154256 mRNA Translation: BAE32468.1
AK166259 mRNA Translation: BAE38667.1
AC090430 Genomic DNA No translation available.
AC126280 Genomic DNA No translation available.
BC031419 mRNA Translation: AAH31419.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS49822.1

NCBI Reference Sequences

More...
RefSeqi
NP_941028.2, NM_198626.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000055389; ENSMUSP00000050246; ENSMUSG00000047434

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
268880

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:268880

UCSC genome browser

More...
UCSCi
uc007yxa.2, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK154256 mRNA Translation: BAE32468.1
AK166259 mRNA Translation: BAE38667.1
AC090430 Genomic DNA No translation available.
AC126280 Genomic DNA No translation available.
BC031419 mRNA Translation: AAH31419.1 Different initiation.
CCDSiCCDS49822.1
RefSeqiNP_941028.2, NM_198626.2

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4WLGX-ray3.00A/B87-392[»]
4WLMX-ray3.00A/B87-392[»]
4WLZX-ray3.03A/B87-392[»]
4WM0X-ray2.37A87-392[»]
4WMAX-ray1.62A87-392[»]
4WMBX-ray2.05A87-392[»]
4WMIX-ray1.87A87-392[»]
4WMKX-ray2.08A87-392[»]
4WN2X-ray1.95A87-392[»]
4WNHX-ray1.95A87-392[»]
SMRiQ3U4G3
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi234571, 1 interactor
DIPiDIP-61862N
IntActiQ3U4G3, 1 interactor
STRINGi10090.ENSMUSP00000050246

Protein family/group databases

CAZyiGT8, Glycosyltransferase Family 8

PTM databases

iPTMnetiQ3U4G3
PhosphoSitePlusiQ3U4G3

Proteomic databases

EPDiQ3U4G3
MaxQBiQ3U4G3
PaxDbiQ3U4G3
PeptideAtlasiQ3U4G3
PRIDEiQ3U4G3

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
53804, 49 antibodies

Genome annotation databases

EnsembliENSMUST00000055389; ENSMUSP00000050246; ENSMUSG00000047434
GeneIDi268880
KEGGimmu:268880
UCSCiuc007yxa.2, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
152002
MGIiMGI:2146443, Xxylt1

Phylogenomic databases

eggNOGiKOG3765, Eukaryota
GeneTreeiENSGT00940000158154
HOGENOMiCLU_048175_0_0_1
InParanoidiQ3U4G3
KOiK23800
OMAiYSLACGW
OrthoDBi830935at2759
TreeFamiTF323210

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
268880, 0 hits in 18 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Xxylt1, mouse

Protein Ontology

More...
PROi
PR:Q3U4G3
RNActiQ3U4G3, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000047434, Expressed in embryonic post-anal tail and 161 other tissues
GenevisibleiQ3U4G3, MM

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR002495, Glyco_trans_8
IPR029044, Nucleotide-diphossugar_trans
IPR042465, XXLT1
PANTHERiPTHR46612, PTHR46612, 1 hit
PfamiView protein in Pfam
PF01501, Glyco_transf_8, 1 hit
SUPFAMiSSF53448, SSF53448, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiXXLT1_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q3U4G3
Secondary accession number(s): E9QL73, Q3TLX5, Q8K2I0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: July 27, 2011
Last modified: October 7, 2020
This is version 102 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
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