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Protein
Submitted name:

Uncharacterized protein

Gene

Col12a1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Col12a1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88448 Col12a1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiQ3TNZ7

Expressioni

Gene expression databases

GenevisibleiQ3TNZ7 MM

Structurei

3D structure databases

ProteinModelPortaliQ3TNZ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 81Fibronectin type-IIIInterPro annotationAdd BLAST81
Domaini82 – 170Fibronectin type-IIIInterPro annotationAdd BLAST89
Domaini171 – 258Fibronectin type-IIIInterPro annotationAdd BLAST88
Domaini287 – 460VWFAInterPro annotationAdd BLAST174

Phylogenomic databases

eggNOGiENOG410IS7D Eukaryota
ENOG4111RUM LUCA
HOGENOMiHOG000111877

Family and domain databases

CDDicd00063 FN3, 3 hits
Gene3Di2.60.40.10, 3 hits
3.40.50.410, 1 hit
InterProiView protein in InterPro
IPR039082 COL12A1
IPR013320 ConA-like_dom_sf
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR001791 Laminin_G
IPR002035 VWF_A
IPR036465 vWFA_dom_sf
PANTHERiPTHR45047:SF2 PTHR45047:SF2, 1 hit
PfamiView protein in Pfam
PF00041 fn3, 3 hits
PF00092 VWA, 1 hit
SMARTiView protein in SMART
SM00060 FN3, 3 hits
SM00210 TSPN, 1 hit
SM00327 VWA, 1 hit
SUPFAMiSSF49265 SSF49265, 2 hits
SSF49899 SSF49899, 1 hit
SSF53300 SSF53300, 1 hit
PROSITEiView protein in PROSITE
PS50853 FN3, 3 hits
PS50234 VWFA, 1 hit

Sequencei

Sequence statusi: Fragment.

Q3TNZ7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
TTNSLSVAWD HADGPVQQYR IIYSPTVGDP IDEYTTVPGR RNNVILQPLQ
60 70 80 90 100
PDTPYKITVI AIYEDGDGGH LTGNGRTVGL LPPQNIHIFD EWYTRFRVSW
110 120 130 140 150
DPSPSPVLGY KIVYKPVGSN EPMEAFVGEV TSYTLHNLNP STTYDVSVYA
160 170 180 190 200
QYDSGLSVPL TDQGTTLYLN VTDLKTYQVG WDTFCVKWSP HRAATSYRLK
210 220 230 240 250
LSPADGTRGQ EITVRGSETS HCFTGLSPEA EYGVTVFVQT PNLEGPGVPI
260 270 280 290 300
KEQTTVKPTE APTEPPTPSP PPTIPPARDV CKGAKADIVF LTDASWSIGD
310 320 330 340 350
DNFNKVVKFI FNTVGAFDEV NPAGIQVSFV QYSDEVKSEF KLNTYNDKAL
360 370 380 390 400
ALGALQNIRY RGGNTRTGKA LTFIKEKVLT WESGMRKNVP KVLVVVTDGR
410 420 430 440 450
SQDEVKKAAF VIQQSGFSVF VVGVADVDYN ELANIASKPS ERHVFIVDDF
460 470 480 490 500
ESFEKIEDNL ITFVCETATS SCPLIYLDGY TSPGFKMLEA YNLTEKNFAS
510 520 530 540 550
VQGVSLESGS FPSYSAYRLQ KNAFINQPTA ELHPNGLPPS YTIILLFRLL
560 570 580 590 600
PETPSDPFAI WQITDRDYRP QVGVIADPSS KTLSFFNKDT RGEVQTVTFD
610 620 630
TDEVKTLFYG SFHKVHIVVT SKSVKIYIDC YEI
Length:633
Mass (Da):70,192
Last modified:October 11, 2005 - v1
Checksum:i36A5056DE67B5E0D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei633Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK164846 mRNA Translation: BAE37940.1
UniGeneiMm.3819

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK164846 mRNA Translation: BAE37940.1
UniGeneiMm.3819

3D structure databases

ProteinModelPortaliQ3TNZ7
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiQ3TNZ7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:88448 Col12a1

Phylogenomic databases

eggNOGiENOG410IS7D Eukaryota
ENOG4111RUM LUCA
HOGENOMiHOG000111877

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

GenevisibleiQ3TNZ7 MM

Family and domain databases

CDDicd00063 FN3, 3 hits
Gene3Di2.60.40.10, 3 hits
3.40.50.410, 1 hit
InterProiView protein in InterPro
IPR039082 COL12A1
IPR013320 ConA-like_dom_sf
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR001791 Laminin_G
IPR002035 VWF_A
IPR036465 vWFA_dom_sf
PANTHERiPTHR45047:SF2 PTHR45047:SF2, 1 hit
PfamiView protein in Pfam
PF00041 fn3, 3 hits
PF00092 VWA, 1 hit
SMARTiView protein in SMART
SM00060 FN3, 3 hits
SM00210 TSPN, 1 hit
SM00327 VWA, 1 hit
SUPFAMiSSF49265 SSF49265, 2 hits
SSF49899 SSF49899, 1 hit
SSF53300 SSF53300, 1 hit
PROSITEiView protein in PROSITE
PS50853 FN3, 3 hits
PS50234 VWFA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TNZ7_MOUSE
AccessioniPrimary (citable) accession number: Q3TNZ7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 12, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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