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Protein

GON-4-like protein

Gene

GON4L

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Has transcriptional repressor activity, probably as part of a complex with YY1, SIN3A AND HDAC1. Required for B cell lymphopoiesis.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRepressor
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
GON-4-like protein
Alternative name(s):
GON-4 homolog
Gene namesi
Name:GON4L
Synonyms:GON4, KIAA1606
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000116580.18
HGNCiHGNC:25973 GON4L
MIMi610393 gene
neXtProtiNX_Q3T8J9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

DisGeNETi54856
OpenTargetsiENSG00000116580
PharmGKBiPA142671723

Polymorphism and mutation databases

BioMutaiGON4L
DMDMi84029264

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001971091 – 2241GON-4-like proteinAdd BLAST2241

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei206PhosphoserineCombined sources1
Modified residuei346PhosphoserineCombined sources1
Modified residuei775PhosphoserineBy similarity1
Modified residuei1268PhosphoserineCombined sources1
Modified residuei1426PhosphoserineCombined sources1
Modified residuei1896PhosphoserineCombined sources1
Modified residuei1902PhosphoserineCombined sources1
Modified residuei1977PhosphoserineCombined sources1
Modified residuei2107PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ3T8J9
MaxQBiQ3T8J9
PaxDbiQ3T8J9
PeptideAtlasiQ3T8J9
PRIDEiQ3T8J9
ProteomicsDBi61875
61876 [Q3T8J9-2]
61877 [Q3T8J9-3]

PTM databases

iPTMnetiQ3T8J9
PhosphoSitePlusiQ3T8J9

Expressioni

Gene expression databases

BgeeiENSG00000116580 Expressed in 202 organ(s), highest expression level in small intestine Peyer's patch
ExpressionAtlasiQ3T8J9 baseline and differential
GenevisibleiQ3T8J9 HS

Organism-specific databases

HPAiHPA006986
HPA057305
HPA074504

Interactioni

Subunit structurei

Found in a complex with YY1, SIN3A and HDAC1.By similarity

Protein-protein interaction databases

BioGridi120206, 9 interactors
IntActiQ3T8J9, 2 interactors
STRINGi9606.ENSP00000271883

Structurei

3D structure databases

ProteinModelPortaliQ3T8J9
SMRiQ3T8J9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1624 – 1696PAH 1PROSITE-ProRule annotationAdd BLAST73
Domaini1706 – 1777PAH 2PROSITE-ProRule annotationAdd BLAST72
Domaini2148 – 2201Myb-likePROSITE-ProRule annotationAdd BLAST54

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni600 – 1339Required for interaction with YY1, SIN3A AND HDAC1, and transcriptional repression activityBy similarityAdd BLAST740

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi245 – 248Poly-Lys4
Compositional biasi448 – 454Poly-Pro7
Compositional biasi517 – 576Asp-richAdd BLAST60
Compositional biasi1449 – 1569Glu-richAdd BLAST121

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG410IHDM Eukaryota
ENOG410XS4M LUCA
GeneTreeiENSGT00390000016256
HOVERGENiHBG081563
InParanoidiQ3T8J9
OMAiQESWLPS
OrthoDBiEOG091G02EQ
PhylomeDBiQ3T8J9
TreeFamiTF343327

Family and domain databases

InterProiView protein in InterPro
IPR033277 GON-4-like
IPR009057 Homeobox-like_sf
IPR017877 Myb-like_dom
IPR003822 PAH
IPR036600 PAH_sf
PANTHERiPTHR16088:SF11 PTHR16088:SF11, 1 hit
PfamiView protein in Pfam
PF02671 PAH, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47762 SSF47762, 2 hits
PROSITEiView protein in PROSITE
PS50090 MYB_LIKE, 1 hit
PS51477 PAH, 2 hits

Sequences (3+)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q3T8J9-1) [UniParc]FASTAAdd to basket
Also known as: Isoform A

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MLPCKKRRTT VTESLQHKGN QEENNVDLES AVKPESDQVK DLSSVSLSWD
60 70 80 90 100
PSHGRVAGFE VQSLQDAGNQ LGMEDTSLSS GMLTQNTNVP ILEGVDVAIS
110 120 130 140 150
QGITLPSLES FHPLNIHIGK GKLHATGSKR GKKMTLRPGP VTQEDRCDHL
160 170 180 190 200
TLKEPFSGEP SEEVKEEGGK PQMNSEGEIP SLPSGSQSAK PVSQPRKSTQ
210 220 230 240 250
PDVCASPQEK PLRTLFHQPE EEIEDGGLFI PMEEQDNEES EKRRKKKKGT
260 270 280 290 300
KRKRDGRGQE GTLAYDLKLD DMLDRTLEDG AKQHNLTAVN VRNILHEVIT
310 320 330 340 350
NEHVVAMMKA AISETEDMPM FEPKMTRSKL KEVVEKGVVI PTWNISPIKK
360 370 380 390 400
ANEIKPPQFV DIHLEEDDSS DEEYQPDDEE EDETAEESLL ESDVESTASS
410 420 430 440 450
PRGAKKSRLR QSSEMTETDE ESGILSEAEK VTTPAIRHIS AEVVPMGPPP
460 470 480 490 500
PPKPKQTRDS TFMEKLHAVD EELASSPVCM DSFQPMDDSL IAFRTRSKMP
510 520 530 540 550
LKDVPLGQLE AELQAPDITP DMYDPNTADD EDWKMWLGGL MNDDVGNEDE
560 570 580 590 600
ADDDDDPEYN FLEDLDEPDT EDFRTDRAVR ITKKEVNELM EELFETFQDE
610 620 630 640 650
MGFSNMEDDG PEEEECVAEP RPNFNTPQAL RFEEPLANLL NEQHRTVKEL
660 670 680 690 700
FEQLKMKKSS AKQLQEVEKV KPQSEKVHQT LILDPAQRKR LQQQMQQHVQ
710 720 730 740 750
LLTQIHLLAT CNPNLNPEAT TTRIFLKELG TFAQSSIALH HQYNPKFQTL
760 770 780 790 800
FQPCNLMGAM QLIEDFSTHV SIDCSPHKTV KKTANEFPCL PKQVAWILAT
810 820 830 840 850
SKVFMYPELL PVCSLKAKNP QDKIVFTKAE DNLLALGLKH FEGTEFPNPL
860 870 880 890 900
ISKYLLTCKT AHQLTVRIKN LNMNRAPDNI IKFYKKTKQL PVLGKCCEEI
910 920 930 940 950
QPHQWKPPIE REEHRLPFWL KASLPSIQEE LRHMADGARE VGNMTGTTEI
960 970 980 990 1000
NSDRSLEKDN LELGSESRYP LLLPKGVVLK LKPVATRFPR KAWRQKRSSV
1010 1020 1030 1040 1050
LKPLLIQPSP SLQPSFNPGK TPARSTHSEA PPSKMVLRIP HPIQPATVLQ
1060 1070 1080 1090 1100
TVPGVPPLGV SGGESFESPA ALPAVPPEAR TSFPLSESQT LLSSAPVPKV
1110 1120 1130 1140 1150
MLPSLAPSKF RKPYVRRRPS KRRGVKASPC MKPAPVIHHP ASVIFTVPAT
1160 1170 1180 1190 1200
TVKIVSLGGG CNMIQPVNAA VAQSPQTIPI TTLLVNPTSF PCPLNQSLVA
1210 1220 1230 1240 1250
SSVSPLIVSG NSVNLPIPST PEDKAHVNVD IACAVADGEN AFQGLEPKLE
1260 1270 1280 1290 1300
PQELSPLSAT VFPKVEHSPG PPLADAECQE GLSENSACRW TVVKTEEGRQ
1310 1320 1330 1340 1350
ALEPLPQGIQ ESLNNPTPGD LEEIVKMEPE EAREEISGSP ERDICDDIKV
1360 1370 1380 1390 1400
EHAVELDTGA PSEELSSAGE VTKQTVLQKE EERSQPTKTP SSSQEPPDEG
1410 1420 1430 1440 1450
TSGTDVNKGS SKNALSSMDP EVRLSSPPGK PEDSSSVDGQ SVGTPVGPET
1460 1470 1480 1490 1500
GGEKNGPEEE EEEDFDDLTQ DEEDEMSSAS EESVLSVPEL QETMEKLTWL
1510 1520 1530 1540 1550
ASERRMSQEG ESEEENSQEE NSEPEEEEEE EAEGMESLQK EDEMTDEAVG
1560 1570 1580 1590 1600
DSAEKPPTFA SPETAPEVET SRTPPGESIK AAGKGRNNHR ARNKRGSRAR
1610 1620 1630 1640 1650
ASKDTSKLLL LYDEDILERD PLREQKDLAF AQAYLTRVRE ALQHIPGKYE
1660 1670 1680 1690 1700
DFLQVIYEFE SSTQRRTAVD LYKSLQILLQ DWPQLLKDFA AFLLPEQALA
1710 1720 1730 1740 1750
CGLFEEQQAF EKSRKFLRQL EICFAENPSH HQKIIKVLQG CADCLPQEIT
1760 1770 1780 1790 1800
ELKTQMWQLL KGHDHLQDEF SIFFDHLRPA ASRMGDFEEI NWTEEKEYEF
1810 1820 1830 1840 1850
DGFEEVALPD VEEEEEPPKI PTASKNKRKK EIGVQNHDKE TEWPDGAKDC
1860 1870 1880 1890 1900
ACSCHEGGPD SKLKKSKRRS CSHCSSKVCD SKSYKSKEPH ELVGSSPHRE
1910 1920 1930 1940 1950
ASPMPGAKEA GQGKDMMEEE APEERESTEA TQSRTVRTTR KGEMPVSAGL
1960 1970 1980 1990 2000
AVGSTLPSPR EVTVTERLLL DGPPPHSPET PQFPPTTGAV LYTVKRNQVG
2010 2020 2030 2040 2050
PEVRSCPKAS PRLQKEREGQ KAVSESEALM LVWDASETEK LPGTVEPPAS
2060 2070 2080 2090 2100
FLSPVSSKTR DAGRRHVSGK PDTQERWLPS SRARVKTRDR TCPVHESPSG
2110 2120 2130 2140 2150
IDTSETSPKA PRGGLAKDSG TQAKGPEGEQ QPKAAEATVC ANNSKVSSTG
2160 2170 2180 2190 2200
EKVVLWTREA DRVILTMCQE QGAQPQTFNI ISQQLGNKTP AEVSHRFREL
2210 2220 2230 2240
MQLFHTACEA SSEDEDDATS TSNADQLSDH GDLLSEEELD E
Length:2,241
Mass (Da):248,620
Last modified:October 11, 2005 - v1
Checksum:i07959F5B5E832DC7
GO
Isoform 2 (identifier: Q3T8J9-2) [UniParc]FASTAAdd to basket
Also known as: Isoform B

The sequence of this isoform differs from the canonical sequence as follows:
     1492-1529: ETMEKLTWLA...ENSEPEEEEE → VRAGEYSQVF...TMDSPKIICI
     1530-2241: Missing.

Show »
Length:1,529
Mass (Da):169,107
Checksum:i3813E51701483286
GO
Isoform 3 (identifier: Q3T8J9-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1948-1948: Missing.

Show »
Length:2,240
Mass (Da):248,549
Checksum:iF9278C03C9382D21
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A4PB68A4PB68_HUMAN
GON-4-like protein
GON4L
970Annotation score:
A0A087WUE6A0A087WUE6_HUMAN
GON-4-like protein
GON4L
1,542Annotation score:

Sequence cautioni

The sequence CAD97829 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence CAH10549 differs from that shown. Reason: Erroneous termination at position 1114. Translated as Tyr.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti433T → A in AAR01262 (Ref. 1) Curated1
Sequence conflicti433T → A in CAD97829 (PubMed:11230166).Curated1
Sequence conflicti626T → A in CAH10549 (PubMed:11230166).Curated1
Sequence conflicti988F → S in AAR01262 (Ref. 1) Curated1
Sequence conflicti988F → S in CAD97829 (PubMed:11230166).Curated1
Sequence conflicti1150T → S in CAH10549 (PubMed:11230166).Curated1
Sequence conflicti1299R → G in CAH10549 (PubMed:11230166).Curated1
Sequence conflicti1382E → G in AAR01262 (Ref. 1) Curated1
Sequence conflicti1382E → G in CAD97829 (PubMed:11230166).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_056169150L → F. Corresponds to variant dbSNP:rs3738586Ensembl.1
Natural variantiVAR_056170416T → A. Corresponds to variant dbSNP:rs34939643Ensembl.1
Natural variantiVAR_0561711197S → P. Corresponds to variant dbSNP:rs676814Ensembl.1
Natural variantiVAR_0243201418M → V1 PublicationCorresponds to variant dbSNP:rs2297775Ensembl.1
Natural variantiVAR_0561721539Q → E. Corresponds to variant dbSNP:rs607790Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0165801492 – 1529ETMEK…EEEEE → VRAGEYSQVFRGLSNMYHLL ICHLLACCTMDSPKIICI in isoform 2. 3 PublicationsAdd BLAST38
Alternative sequenceiVSP_0165811530 – 2241Missing in isoform 2. 3 PublicationsAdd BLAST712
Alternative sequenceiVSP_0165821948Missing in isoform 3. 2 Publications1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY335490 mRNA Translation: AAR01260.1
AY335491 mRNA Translation: AAR01261.1
AY335492 mRNA Translation: AAR01262.1
AL136565 mRNA Translation: CAB66500.2
BX537764 mRNA Translation: CAD97829.1 Different initiation.
BX648043 mRNA Translation: CAH10549.1 Different termination.
AL139128 Genomic DNA No translation available.
AL162734 Genomic DNA No translation available.
CH471121 Genomic DNA Translation: EAW53029.1
CH471121 Genomic DNA Translation: EAW53030.1
BC036740 mRNA Translation: AAH36740.2
BC064933 mRNA Translation: AAH64933.1
BC114629 mRNA Translation: AAI14630.1
AB046826 mRNA Translation: BAB13432.1
CCDSiCCDS1121.1 [Q3T8J9-2]
CCDS44242.1 [Q3T8J9-3]
CCDS60296.1 [Q3T8J9-1]
RefSeqiNP_001269785.1, NM_001282856.1 [Q3T8J9-1]
NP_001269787.1, NM_001282858.1 [Q3T8J9-3]
NP_001269789.1, NM_001282860.1 [Q3T8J9-1]
NP_001269790.1, NM_001282861.1 [Q3T8J9-2]
NP_115668.4, NM_032292.5 [Q3T8J9-2]
XP_006711456.1, XM_006711393.3 [Q3T8J9-3]
XP_006711457.1, XM_006711394.3 [Q3T8J9-3]
UniGeneiHs.656361

Genome annotation databases

EnsembliENST00000271883; ENSP00000271883; ENSG00000116580 [Q3T8J9-3]
ENST00000361040; ENSP00000354322; ENSG00000116580 [Q3T8J9-2]
ENST00000368331; ENSP00000357315; ENSG00000116580 [Q3T8J9-1]
ENST00000437809; ENSP00000396117; ENSG00000116580 [Q3T8J9-3]
ENST00000615926; ENSP00000483100; ENSG00000116580 [Q3T8J9-1]
GeneIDi54856
KEGGihsa:54856
UCSCiuc001flz.4 human [Q3T8J9-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Similar proteinsi

Cross-referencesi

Web resourcesi

Wikipedia

GON4L entry

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY335490 mRNA Translation: AAR01260.1
AY335491 mRNA Translation: AAR01261.1
AY335492 mRNA Translation: AAR01262.1
AL136565 mRNA Translation: CAB66500.2
BX537764 mRNA Translation: CAD97829.1 Different initiation.
BX648043 mRNA Translation: CAH10549.1 Different termination.
AL139128 Genomic DNA No translation available.
AL162734 Genomic DNA No translation available.
CH471121 Genomic DNA Translation: EAW53029.1
CH471121 Genomic DNA Translation: EAW53030.1
BC036740 mRNA Translation: AAH36740.2
BC064933 mRNA Translation: AAH64933.1
BC114629 mRNA Translation: AAI14630.1
AB046826 mRNA Translation: BAB13432.1
CCDSiCCDS1121.1 [Q3T8J9-2]
CCDS44242.1 [Q3T8J9-3]
CCDS60296.1 [Q3T8J9-1]
RefSeqiNP_001269785.1, NM_001282856.1 [Q3T8J9-1]
NP_001269787.1, NM_001282858.1 [Q3T8J9-3]
NP_001269789.1, NM_001282860.1 [Q3T8J9-1]
NP_001269790.1, NM_001282861.1 [Q3T8J9-2]
NP_115668.4, NM_032292.5 [Q3T8J9-2]
XP_006711456.1, XM_006711393.3 [Q3T8J9-3]
XP_006711457.1, XM_006711394.3 [Q3T8J9-3]
UniGeneiHs.656361

3D structure databases

ProteinModelPortaliQ3T8J9
SMRiQ3T8J9
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi120206, 9 interactors
IntActiQ3T8J9, 2 interactors
STRINGi9606.ENSP00000271883

PTM databases

iPTMnetiQ3T8J9
PhosphoSitePlusiQ3T8J9

Polymorphism and mutation databases

BioMutaiGON4L
DMDMi84029264

Proteomic databases

EPDiQ3T8J9
MaxQBiQ3T8J9
PaxDbiQ3T8J9
PeptideAtlasiQ3T8J9
PRIDEiQ3T8J9
ProteomicsDBi61875
61876 [Q3T8J9-2]
61877 [Q3T8J9-3]

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000271883; ENSP00000271883; ENSG00000116580 [Q3T8J9-3]
ENST00000361040; ENSP00000354322; ENSG00000116580 [Q3T8J9-2]
ENST00000368331; ENSP00000357315; ENSG00000116580 [Q3T8J9-1]
ENST00000437809; ENSP00000396117; ENSG00000116580 [Q3T8J9-3]
ENST00000615926; ENSP00000483100; ENSG00000116580 [Q3T8J9-1]
GeneIDi54856
KEGGihsa:54856
UCSCiuc001flz.4 human [Q3T8J9-1]

Organism-specific databases

CTDi54856
DisGeNETi54856
EuPathDBiHostDB:ENSG00000116580.18
GeneCardsiGON4L
H-InvDBiHIX0001135
HIX0028547
HGNCiHGNC:25973 GON4L
HPAiHPA006986
HPA057305
HPA074504
MIMi610393 gene
neXtProtiNX_Q3T8J9
OpenTargetsiENSG00000116580
PharmGKBiPA142671723
HUGEiSearch...
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IHDM Eukaryota
ENOG410XS4M LUCA
GeneTreeiENSGT00390000016256
HOVERGENiHBG081563
InParanoidiQ3T8J9
OMAiQESWLPS
OrthoDBiEOG091G02EQ
PhylomeDBiQ3T8J9
TreeFamiTF343327

Miscellaneous databases

ChiTaRSiGON4L human
GeneWikiiGON4L
GenomeRNAii54856
PROiPR:Q3T8J9
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000116580 Expressed in 202 organ(s), highest expression level in small intestine Peyer's patch
ExpressionAtlasiQ3T8J9 baseline and differential
GenevisibleiQ3T8J9 HS

Family and domain databases

InterProiView protein in InterPro
IPR033277 GON-4-like
IPR009057 Homeobox-like_sf
IPR017877 Myb-like_dom
IPR003822 PAH
IPR036600 PAH_sf
PANTHERiPTHR16088:SF11 PTHR16088:SF11, 1 hit
PfamiView protein in Pfam
PF02671 PAH, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47762 SSF47762, 2 hits
PROSITEiView protein in PROSITE
PS50090 MYB_LIKE, 1 hit
PS51477 PAH, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiGON4L_HUMAN
AccessioniPrimary (citable) accession number: Q3T8J9
Secondary accession number(s): B7ZBL4
, Q14C93, Q3T8J8, Q5VYZ5, Q5W0D5, Q6AWA6, Q6P1Q6, Q7Z3L3, Q8IY79, Q9BQI1, Q9HCG6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: October 11, 2005
Last modified: November 7, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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