Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein YIF1A

Gene

YIF1A

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Possible role in transport between endoplasmic reticulum and Golgi.By similarity

GO - Biological processi

Keywordsi

Biological processER-Golgi transport, Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YIF1A
Alternative name(s):
YIP1-interacting factor homolog A
Gene namesi
Name:YIF1A
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 29

Organism-specific databases

VGNCiVGNC:37023 YIF1A

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini2 – 138CytoplasmicSequence analysisAdd BLAST137
Transmembranei139 – 159HelicalSequence analysisAdd BLAST21
Topological domaini160 – 174LumenalCuratedAdd BLAST15
Transmembranei175 – 195HelicalSequence analysisAdd BLAST21
Topological domaini196 – 202CytoplasmicCurated7
Transmembranei203 – 225HelicalSequence analysisAdd BLAST23
Topological domaini226 – 229LumenalCurated4
Transmembranei230 – 249HelicalSequence analysisAdd BLAST20
Topological domaini250 – 271CytoplasmicCuratedAdd BLAST22
Transmembranei272 – 292HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Endoplasmic reticulum, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002332742 – 293Protein YIF1AAdd BLAST292

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei12PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ3T196
PRIDEiQ3T196

Expressioni

Gene expression databases

BgeeiENSBTAG00000004829

Interactioni

Subunit structurei

Interacts with YIPF5.By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000006343

Family & Domainsi

Sequence similaritiesi

Belongs to the YIF1 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3094 Eukaryota
COG5197 LUCA
GeneTreeiENSGT00390000009423
HOGENOMiHOG000234333
HOVERGENiHBG053252
InParanoidiQ3T196
KOiK20362
OMAiMFFIVRS
OrthoDBiEOG091G0H35
TreeFamiTF314528

Family and domain databases

InterProiView protein in InterPro
IPR005578 Yif1_fam
PANTHERiPTHR14083 PTHR14083, 1 hit
PfamiView protein in Pfam
PF03878 YIF1, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3T196-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYHSGYGAH GSKHRARAAP DPPPLFDDTS GGYSSQPGGY PAPGADVAFN
60 70 80 90 100
VNHLLGDPMA NMAMAYGSSI ASHGKDMMNK ELHRFVSVNK LKYFFAVDTA
110 120 130 140 150
YVAKKLGLLV FPYTHQNWEV QYSRDVPLPP RQDLNAPDLY IPTMAFITYV
160 170 180 190 200
LLAGMALGIQ KRFSPEVLGL CASTALVWVV MEVLALLLGI YLATVRSDLS
210 220 230 240 250
TFHLLAYSGY KYVGMILSVL TGLLFGSDGY YVALAWTSSA LMYFIVRSLR
260 270 280 290
TAALGPDSMG GPAPRQRLQL YLTLGAAAFQ PLIIYWLTFH LVR
Length:293
Mass (Da):32,102
Last modified:October 11, 2005 - v1
Checksum:iFCA5ED399DF3AE76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102060 mRNA Translation: AAI02061.1
RefSeqiNP_001029441.1, NM_001034269.2
UniGeneiBt.5376

Genome annotation databases

EnsembliENSBTAT00000006343; ENSBTAP00000006343; ENSBTAG00000004829
GeneIDi506336
KEGGibta:506336

Similar proteinsi

Entry informationi

Entry nameiYIF1A_BOVIN
AccessioniPrimary (citable) accession number: Q3T196
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 2, 2006
Last sequence update: October 11, 2005
Last modified: March 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health