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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Xylella fastidiosa Dixon
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotation
ORF Names:XfasaDRAFT_2008Imported
OrganismiXylella fastidiosa DixonImported
Taxonomic identifieri155919 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
Proteomesi
  • UP000004103 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ3RHJ7
SMRiQ3RHJ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Phylogenomic databases

OrthoDBiPOG091H013T

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR023563 Ribosomal_L13_CS
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit

Sequencei

Sequence statusi: Complete.

Q3RHJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTFTAKNET VQRDWYLVDA EGKTLGRLAT ELARRLLGKT KPVYTPHVDT
60 70 80 90 100
GDYLVVINAE KVVVTGKKLT DKYYHRFTGY VGNLKSESLG QALQRHPERV
110 120 130 140
LEIAVKGMLP KGPLGRAMYR KLKVYTGSKH PHTAQQPQVL DI
Length:142
Mass (Da):16,008
Last modified:October 25, 2005 - v1
Checksum:iB1B5D1F195F8B117
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAAL02000001 Genomic DNA Translation: EAO14146.1
RefSeqiWP_004083669.1, NZ_AAAL02000001.1

Genome annotation databases

EnsemblBacteriaiEAO14146; EAO14146; XfasaDRAFT_2008

Similar proteinsi

Entry informationi

Entry nameiQ3RHJ7_XYLFS
AccessioniPrimary (citable) accession number: Q3RHJ7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: March 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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