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Protein
Submitted name:

Tumor necrosis factor (Ligand) superfamily, member 13b, isoform CRA_d

Gene

Tnfsf13b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Tumor necrosis factor (Ligand) superfamily, member 13b, isoform CRA_dImported
Gene namesi
Name:Tnfsf13bImported
ORF Names:mCG_3400Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1344376 Tnfsf13b

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSMUSG00000031497
ExpressionAtlasiQ3KP92 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiQ3KP92
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini172 – 308TNF_2InterPro annotationAdd BLAST137

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili70 – 90Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the tumor necrosis factor family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IHQ4 Eukaryota
ENOG4111XFQ LUCA
HOVERGENiHBG061472
KOiK05476
OMAiMDDSTER
OrthoDBiEOG091G0GBQ

Family and domain databases

Gene3Di2.60.120.40, 1 hit
InterProiView protein in InterPro
IPR006052 TNF_dom
IPR008983 Tumour_necrosis_fac-like_dom
PfamiView protein in Pfam
PF00229 TNF, 1 hit
SUPFAMiSSF49842 SSF49842, 1 hit
PROSITEiView protein in PROSITE
PS50049 TNF_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q3KP92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDESAKTLPP PCLCFCSEKG EDMKVGYDPI TPQKEEGAWF GICRDGRLLA
60 70 80 90 100
ATLLLALLSS SFTAMSLYQL AALQADLMNL RMELQSYRGS ATPAAAGAPE
110 120 130 140 150
LTAGVKLLTP AAPRPHNSSR GHRNRRAFQG PEETEQDVDL SAPPAPCLPG
160 170 180 190 200
CRHSQHDDNG MNLRNIIQDC LQLIADSDTP TIRKGTYTFV PWLLSFKRGN
210 220 230 240 250
ALEEKENKIV VRQTGYFFIY SQVLYTDPIF AMGHVIQRKK VHVFGDELSL
260 270 280 290 300
VTLFRCIQNM PKTLPNNSCY SAGIARLEEG DEIQLAIPRE NAQISRNGDD

TFFGALKLL
Length:309
Mass (Da):34,192
Last modified:November 8, 2005 - v1
Checksum:iF3DE6056E66034B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC106841 mRNA Translation: AAI06842.1
CH466566 Genomic DNA Translation: EDL22046.1
RefSeqiNP_296371.1, NM_033622.1
UniGeneiMm.28835

Genome annotation databases

GeneIDi24099
KEGGimmu:24099

Similar proteinsi

Entry informationi

Entry nameiQ3KP92_MOUSE
AccessioniPrimary (citable) accession number: Q3KP92
Entry historyiIntegrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: June 20, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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