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Protein
Submitted name:

Paired-like homeodomain transcription factor DRG11

Gene

drgx

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi42 – 101HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinPROSITE-ProRule annotationSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Paired-like homeodomain transcription factor DRG11Imported
Gene namesi
Name:drgxImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-070330-1 drgx

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ3BD88
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini40 – 100HomeoboxInterPro annotationAdd BLAST61
Domaini210 – 223OARInterPro annotationAdd BLAST14

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi210 – 223OARPROSITE-ProRule annotationAdd BLAST14

Sequence similaritiesi

Belongs to the paired homeobox family.SAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

eggNOGiKOG0490 Eukaryota
ENOG410YIJ3 LUCA
HOVERGENiHBG106743
PhylomeDBiQ3BD88

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003654 OAR_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF03826 OAR, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS50803 OAR, 1 hit

Sequencei

Sequence statusi: Complete.

Q3BD88-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFYFHCPPQL EGECCRTNTL NTNGFGNHAS GDFDDGFLRR KQRRNRTTFT
60 70 80 90 100
LQQLEALEAV FAQTHYPDVF AREELAMKIN LTEARVQVWF QNRRAKWRKT
110 120 130 140 150
ERGTSEQDGG KEQMNEGNPP ARNLNQSPVD HSRSKKEPME LQQNINRVVG
160 170 180 190 200
SGGPFFPSCL PGTLLNTATY AQALSQVATL KGSPLCSCCV PDPMGLSFLP
210 220 230 240 250
PYGCQSNRTA SVAALRMKAR EHSEAVLQSA NLLGTGSTTG PAAGPALPLS
260 270 280
QNTGGDSSPN SSTPKITSLR RTPDKHLHCQ KEGPDKK
Length:287
Mass (Da):31,504
Last modified:November 22, 2005 - v1
Checksum:i1CB6F5A8C2F8FEEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY753211 mRNA Translation: AAW81987.1
RefSeqiNP_001032182.1, NM_001037105.1
UniGeneiDr.94366

Genome annotation databases

GeneIDi560399
KEGGidre:560399

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY753211 mRNA Translation: AAW81987.1
RefSeqiNP_001032182.1, NM_001037105.1
UniGeneiDr.94366

3D structure databases

ProteinModelPortaliQ3BD88
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi560399
KEGGidre:560399

Organism-specific databases

CTDi644168
ZFINiZDB-GENE-070330-1 drgx

Phylogenomic databases

eggNOGiKOG0490 Eukaryota
ENOG410YIJ3 LUCA
HOVERGENiHBG106743
PhylomeDBiQ3BD88

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003654 OAR_dom
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF03826 OAR, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS50803 OAR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ3BD88_DANRE
AccessioniPrimary (citable) accession number: Q3BD88
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: October 10, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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