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Protein

GTP-binding protein YPTC5

Gene

YPTC5

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Protein transport. Probably involved in vesicular traffic (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi15 – 22GTPBy similarity8
Nucleotide bindingi63 – 67GTPBy similarity5
Nucleotide bindingi125 – 128GTPBy similarity4

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
GTP-binding protein YPTC5
Gene namesi
Name:YPTC5
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001212951 – 206GTP-binding protein YPTC5Add BLAST206

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi205S-geranylgeranyl cysteineBy similarity1
Lipidationi206S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PRIDEiQ39573

Structurei

3D structure databases

ProteinModelPortaliQ39573
SMRiQ39573
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi37 – 45Effector regionCurated9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0394 Eukaryota
ENOG410XNZV LUCA
KOiK07897
OMAiLHEVTIL

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Q39573-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTKKRRLLK VIILGDSGVG KTSLMNQYVQ KKFTKEYKAT IGADFLTKEI
60 70 80 90 100
EVDDKKVTMQ IWDTAGQERF QSLGSAFYRG ADCCVLVFDV NNAKSFDDLD
110 120 130 140 150
NWRDEFIIQA GPPDPDNFPF MVLGNKIDEN GGSSRQVSEK KAKAWCASKG
160 170 180 190 200
SIPYFETSAK EDINVEAAFT CITRNALRNE KEEELFMPDA VDMNTTATQR

KRAGCC
Length:206
Mass (Da):23,142
Last modified:November 1, 1997 - v1
Checksum:i2F02E469BBDA0AA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U13170 Genomic DNA Translation: AAA82728.1
PIRiJC4107
RefSeqiXP_001691181.1, XM_001691129.1
UniGeneiCre.15175

Genome annotation databases

EnsemblPlantsiPNW83222; PNW83222; CHLRE_06g311900v5
GeneIDi5716775
GrameneiPNW83222; PNW83222; CHLRE_06g311900v5
KEGGicre:CHLREDRAFT_195521

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U13170 Genomic DNA Translation: AAA82728.1
PIRiJC4107
RefSeqiXP_001691181.1, XM_001691129.1
UniGeneiCre.15175

3D structure databases

ProteinModelPortaliQ39573
SMRiQ39573
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ39573

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNW83222; PNW83222; CHLRE_06g311900v5
GeneIDi5716775
GrameneiPNW83222; PNW83222; CHLRE_06g311900v5
KEGGicre:CHLREDRAFT_195521

Phylogenomic databases

eggNOGiKOG0394 Eukaryota
ENOG410XNZV LUCA
KOiK07897
OMAiLHEVTIL

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYPTC5_CHLRE
AccessioniPrimary (citable) accession number: Q39573
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 7, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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