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Protein

GTP-binding protein YPTC1

Gene

YPTC1

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Protein transport. Probably involved in vesicular traffic (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi15 – 23GTPBy similarity9
Nucleotide bindingi33 – 40GTPBy similarity8
Nucleotide bindingi63 – 67GTPBy similarity5
Nucleotide bindingi121 – 124GTPBy similarity4
Nucleotide bindingi151 – 153GTPBy similarity3

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
GTP-binding protein YPTC1
Gene namesi
Name:YPTC1
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001212931 – 203GTP-binding protein YPTC1Add BLAST203

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi202S-geranylgeranyl cysteineBy similarity1
Lipidationi203S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PRIDEiQ39571
ProMEXiQ39571

Structurei

3D structure databases

ProteinModelPortaliQ39571
SMRiQ39571
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi37 – 45Effector regionCurated9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0084 Eukaryota
ENOG410XQN5 LUCA
KOiK07874
OMAiIDRFACE

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Q39571-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DTYTESYIST IGVDFKIRTV
60 70 80 90 100
ELDGKVIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
110 120 130 140 150
QWLNEIDRYA SENVNKLLVG NKSDLTSKKV VEYSVAKAFA DEIGIPFLET
160 170 180 190 200
SAKNATNVEQ AFMTMAAEIK NRMASQPIPT KAGGPVVRPQ EGKPINSKSS

SCC
Length:203
Mass (Da):22,599
Last modified:November 1, 1997 - v1
Checksum:iDD22420FF2F35E1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U13168 Genomic DNA Translation: AAA82727.1
PIRiJC4105
RefSeqiXP_001703135.1, XM_001703083.1
UniGeneiCre.20118

Genome annotation databases

EnsemblPlantsiPNW75798; PNW75798; CHLRE_12g560150v5
GeneIDi5728675
GrameneiPNW75798; PNW75798; CHLRE_12g560150v5
KEGGicre:CHLREDRAFT_60490

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U13168 Genomic DNA Translation: AAA82727.1
PIRiJC4105
RefSeqiXP_001703135.1, XM_001703083.1
UniGeneiCre.20118

3D structure databases

ProteinModelPortaliQ39571
SMRiQ39571
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ39571
ProMEXiQ39571

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNW75798; PNW75798; CHLRE_12g560150v5
GeneIDi5728675
GrameneiPNW75798; PNW75798; CHLRE_12g560150v5
KEGGicre:CHLREDRAFT_60490

Phylogenomic databases

eggNOGiKOG0084 Eukaryota
ENOG410XQN5 LUCA
KOiK07874
OMAiIDRFACE

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYPTC1_CHLRE
AccessioniPrimary (citable) accession number: Q39571
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 7, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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