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Entry version 139 (08 May 2019)
Sequence version 3 (22 Sep 2009)
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Protein

Transcription factor CAULIFLOWER

Gene

CAL

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1, FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1. Positively regulates the APETALA1 and LEAFY expression.2 Publications

Miscellaneous

Mutations in the CAL gene result in a characteristic proliferation of inflorescence meristems in place of floral meristems. The fragment expressed in cal-5 mutant is homolog to the CAL proteins present in Brassica oleracea var. botrytis and may thus explain the 'cauliflower'-shaped floral meristem (PubMed:7824951).1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActivator, Developmental protein, DNA-binding
Biological processDifferentiation, Flowering, Transcription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transcription factor CAULIFLOWER
Short name:
AtCAL
Alternative name(s):
Agamous-like MADS-box protein AGL10
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CAL
Synonyms:AGL10
Ordered Locus Names:At1g26310
ORF Names:F28B23.24
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

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Araporti
AT1G26310

The Arabidopsis Information Resource

More...
TAIRi
locus:2028830 AT1G26310

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi27G → D in cal-3; no visible phenotype. 'Cauliflower' shape when associated with AP1 disruption. 1 Publication1
Mutagenesisi39C → Y in cal-2; no visible phenotype. 'Cauliflower' shape when associated with AP1 disruption. 1 Publication1
Mutagenesisi131E → K in cal-4; no visible phenotype. 'Cauliflower' shape when associated with AP1 disruption. 1 Publication1
Mutagenesisi151 – 255Missing in cal-5; 'Cauliflower' shape. 1 PublicationAdd BLAST105
Mutagenesisi176 – 186ERENILRTKQT → KRENILRTRQI in cal-1; no visible phenotype. 'Cauliflower' shape when associated with AP1 disruption. 1 PublicationAdd BLAST11

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001994801 – 255Transcription factor CAULIFLOWERAdd BLAST255

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q39081

PRoteomics IDEntifications database

More...
PRIDEi
Q39081

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in young flower primordia.

<p>This subsection of the ‘Expression’ section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified ‘at the protein level’.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Expressed at an early stage of floral initiation.

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q39081 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q39081 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer capable of binding to CArG-box sequences.By similarity

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
SOC1O646454EBI-592136,EBI-592041

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
24408, 5 interactors

Database of interacting proteins

More...
DIPi
DIP-33764N

Protein interaction database and analysis system

More...
IntActi
Q39081, 6 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT1G26310.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
Q39081

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 61MADS-boxPROSITE-ProRule annotationAdd BLAST61
Domaini90 – 180K-boxPROSITE-ProRule annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili90 – 198Sequence analysisAdd BLAST109

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG0014 Eukaryota
COG5068 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q39081

KEGG Orthology (KO)

More...
KOi
K09264

Identification of Orthologs from Complete Genome Data

More...
OMAi
LIAPDSH

Database of Orthologous Groups

More...
OrthoDBi
1178730at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q39081

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00265 MADS_MEF2_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.1810.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR033896 MADS_MEF2-like
IPR002487 TF_Kbox
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01486 K-box, 1 hit
PF00319 SRF-TF, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00404 MADSDOMAIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00432 MADS, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF55455 SSF55455, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51297 K_BOX, 1 hit
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q39081-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGRGRVELKR IENKINRQVT FSKRRTGLLK KAQEISVLCD AEVSLIVFSH
60 70 80 90 100
KGKLFEYSSE SCMEKVLERY ERYSYAERQL IAPDSHVNAQ TNWSMEYSRL
110 120 130 140 150
KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN
160 170 180 190 200
ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
210 220 230 240 250
PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL

GCYAA
Length:255
Mass (Da):30,187
Last modified:September 22, 2009 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5F7313A804DF594D
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAA64789 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67505 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67506 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67507 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67508 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67509 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67510 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67511 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67512 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67513 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67514 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67515 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67516 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67517 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67518 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAC67519 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAG50679 differs from that shown. Reason: Erroneous gene model prediction.Curated

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural varianti78R → S in strain: cv. Kas-0. 1
Natural varianti114Y → H in strain: cv. Bu-0. 1
Natural varianti120E → G in strain: cv. Bretagny. 1
Natural varianti122M → K in strain: cv. Kas-0. 1
Natural varianti141I → T in strain: cv. Bu-0. 1
Natural varianti161K → E in strain: cv. Kent. 1
Natural varianti176E → K in strain: cv. Kent and cv. Wassilewskija. 1
Natural varianti182R → K in strain: cv. Bu-0, cv. Landsberg erecta, cv. Li-8 and cv. NL2. 1
Natural varianti184K → R in strain: cv. NL2. 1
Natural varianti186T → I in strain: cv. Wassilewskija. 1
Natural varianti195V → I in strain: cv. Co-1. 1
Natural varianti196D → N in strain: cv. Kent. 1
Natural varianti205Q → QL in strain: cv. Bu-2. 1
Natural varianti209L → F in strain: cv. Li-3. 1
Natural varianti228E → G in strain: cv. Bla-1, cv. Bretagny, cv. Bs-0, cv. Bu-0, cv. Bu-2, cv. Co-1, cv. Kas-0, cv. Kent, cv. Landsberg erecta, cv. Li-3, cv. Li-8, cv. Nd-0, cv. NL2 and cv. Wassilewskija. 1
Natural varianti238N → D in strain: cv. Bu-2. 1
Natural varianti249Y → C in strain: cv. NL2. 1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
L36925 Genomic DNA Translation: AAA64789.1 Sequence problems.
AC079829 Genomic DNA Translation: AAG50679.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE30674.1
AB493477 mRNA Translation: BAH30315.1
AF061401 Genomic DNA Translation: AAC67505.1 Sequence problems.
AF061402 Genomic DNA Translation: AAC67506.1 Sequence problems.
AF061403 Genomic DNA Translation: AAC67507.1 Sequence problems.
AF061404 Genomic DNA Translation: AAC67508.1 Sequence problems.
AF061405 Genomic DNA Translation: AAC67509.1 Sequence problems.
AF061406 Genomic DNA Translation: AAC67510.1 Sequence problems.
AF061407 Genomic DNA Translation: AAC67511.1 Sequence problems.
AF061408 Genomic DNA Translation: AAC67512.1 Sequence problems.
AF061409 Genomic DNA Translation: AAC67513.1 Sequence problems.
AF061410 Genomic DNA Translation: AAC67514.1 Sequence problems.
AF061411 Genomic DNA Translation: AAC67515.1 Sequence problems.
AF061412 Genomic DNA Translation: AAC67516.1 Sequence problems.
AF061413 Genomic DNA Translation: AAC67517.1 Sequence problems.
AF061414 Genomic DNA Translation: AAC67518.1 Sequence problems.
AF061415 Genomic DNA Translation: AAC67519.1 Sequence problems.

Protein sequence database of the Protein Information Resource

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PIRi
E86389

NCBI Reference Sequences

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RefSeqi
NP_564243.1, NM_102395.3

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G26310.1; AT1G26310.1; AT1G26310

Database of genes from NCBI RefSeq genomes

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GeneIDi
839172

Gramene; a comparative resource for plants

More...
Gramenei
AT1G26310.1; AT1G26310.1; AT1G26310

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G26310

Keywords - Coding sequence diversityi

Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L36925 Genomic DNA Translation: AAA64789.1 Sequence problems.
AC079829 Genomic DNA Translation: AAG50679.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE30674.1
AB493477 mRNA Translation: BAH30315.1
AF061401 Genomic DNA Translation: AAC67505.1 Sequence problems.
AF061402 Genomic DNA Translation: AAC67506.1 Sequence problems.
AF061403 Genomic DNA Translation: AAC67507.1 Sequence problems.
AF061404 Genomic DNA Translation: AAC67508.1 Sequence problems.
AF061405 Genomic DNA Translation: AAC67509.1 Sequence problems.
AF061406 Genomic DNA Translation: AAC67510.1 Sequence problems.
AF061407 Genomic DNA Translation: AAC67511.1 Sequence problems.
AF061408 Genomic DNA Translation: AAC67512.1 Sequence problems.
AF061409 Genomic DNA Translation: AAC67513.1 Sequence problems.
AF061410 Genomic DNA Translation: AAC67514.1 Sequence problems.
AF061411 Genomic DNA Translation: AAC67515.1 Sequence problems.
AF061412 Genomic DNA Translation: AAC67516.1 Sequence problems.
AF061413 Genomic DNA Translation: AAC67517.1 Sequence problems.
AF061414 Genomic DNA Translation: AAC67518.1 Sequence problems.
AF061415 Genomic DNA Translation: AAC67519.1 Sequence problems.
PIRiE86389
RefSeqiNP_564243.1, NM_102395.3

3D structure databases

SMRiQ39081
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi24408, 5 interactors
DIPiDIP-33764N
IntActiQ39081, 6 interactors
STRINGi3702.AT1G26310.1

Proteomic databases

PaxDbiQ39081
PRIDEiQ39081

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G26310.1; AT1G26310.1; AT1G26310
GeneIDi839172
GrameneiAT1G26310.1; AT1G26310.1; AT1G26310
KEGGiath:AT1G26310

Organism-specific databases

AraportiAT1G26310
TAIRilocus:2028830 AT1G26310

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
InParanoidiQ39081
KOiK09264
OMAiLIAPDSH
OrthoDBi1178730at2759
PhylomeDBiQ39081

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q39081

Gene expression databases

ExpressionAtlasiQ39081 baseline and differential
GenevisibleiQ39081 AT

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033896 MADS_MEF2-like
IPR002487 TF_Kbox
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF01486 K-box, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS51297 K_BOX, 1 hit
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCAL_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q39081
Secondary accession number(s): C0SUX4
, Q9C675, Q9S779, Q9S780, Q9SBG8, Q9SBG9, Q9SBH0, Q9SBH1, Q9SBH2, Q9SBH3, Q9SBH4, Q9SBH5, Q9SBH6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 9, 2003
Last sequence update: September 22, 2009
Last modified: May 8, 2019
This is version 139 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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