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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Lactobacillus sakei subsp. sakei (strain 23K)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciLSAK314315:LCA_RS07045-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:LCA_1421
OrganismiLactobacillus sakei subsp. sakei (strain 23K)
Taxonomic identifieri314315 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000002707 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002420361 – 563Arginine--tRNA ligaseAdd BLAST563

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi314315.LSA1421

Structurei

3D structure databases

ProteinModelPortaliQ38VQ9
SMRiQ38VQ9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi122 – 132"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C75 Bacteria
COG0018 LUCA
KOiK01887
OMAiNKPLHLG
OrthoDBiPOG091H01RF

Family and domain databases

CDDicd00671 ArgRS_core, 1 hit
Gene3Di3.30.1360.70, 1 hit
3.40.50.620, 1 hit
HAMAPiMF_00123 Arg_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR001278 Arg-tRNA-ligase
IPR005148 Arg-tRNA-synth_N
IPR036695 Arg-tRNA-synth_N_sf
IPR035684 ArgRS_core
IPR008909 DALR_anticod-bd
IPR014729 Rossmann-like_a/b/a_fold
IPR009080 tRNAsynth_Ia_anticodon-bd
PANTHERiPTHR11956 PTHR11956, 1 hit
PfamiView protein in Pfam
PF03485 Arg_tRNA_synt_N, 1 hit
PF05746 DALR_1, 1 hit
PF00750 tRNA-synt_1d, 1 hit
PRINTSiPR01038 TRNASYNTHARG
SMARTiView protein in SMART
SM01016 Arg_tRNA_synt_N, 1 hit
SM00836 DALR_1, 1 hit
SUPFAMiSSF47323 SSF47323, 1 hit
SSF55190 SSF55190, 1 hit
TIGRFAMsiTIGR00456 argS, 1 hit

Sequencei

Sequence statusi: Complete.

Q38VQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFKQQVVTA LTGVLGDSLP AEKVAQLIET PKTSDLGDYA FPTFILAKTL
60 70 80 90 100
RKAPQQIAQD LVDQMDVAGF EKVIANGPYI NFFLDKAAFS DQILKTVLTE
110 120 130 140 150
AAKYGESDLG HGGNVPIDMS SPNIAKPISM GHLRSTVIGN SIAKILTKVG
160 170 180 190 200
FNPIKINHLG DWGTQFGKLI VAYKKWGSEE EVKEDPITNL LKYYVKFHQE
210 220 230 240 250
DVEHPELDDE ARAWFRKLEA GDEEATQLWS WFRSESLKEF QKIYDMLGVE
260 270 280 290 300
FDSYNGEAFY NDKMDAVVEA IESKGLLQES RGAEIVDLTA YNLNPALIKK
310 320 330 340 350
SDGATLYMTR DLAAAMYRHD TYNFVQSLYV VGGEQREHFN QLKAVLKEMG
360 370 380 390 400
NDWSDEIHHI PFGLITQGGK KLSTRSGRVI LLEEVLNDAV KLAGAQIEAK
410 420 430 440 450
NPDLPNREEV AKQVGIGAVI FHDLKNDRLD NFDFDLEEVV RFEGETGPYV
460 470 480 490 500
QYTNARAQSI LRKANQEVVV DDQLVVADDN AWDVLKMLSN FPAVIARASK
510 520 530 540 550
EYEPSIVAKY ALRLAKAFNK YYANSKILAD DDQRNARLSL VKSVSIVLET
560
ALDLLGVQAP KEM
Length:563
Mass (Da):62,972
Last modified:November 22, 2005 - v1
Checksum:iB596E667A0139567
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR936503 Genomic DNA Translation: CAI55724.1
RefSeqiWP_011375114.1, NC_007576.1

Genome annotation databases

EnsemblBacteriaiCAI55724; CAI55724; LCA_1421
GeneIDi29636956
KEGGilsa:LCA_1421

Similar proteinsi

Entry informationi

Entry nameiSYR_LACSS
AccessioniPrimary (citable) accession number: Q38VQ9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 22, 2005
Last modified: June 20, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

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