UniProtKB - Q38998 (AKT1_ARATH)
Protein
Potassium channel AKT1
Gene
AKT1
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Highly selective inward-rectifying potassium channel that mediate potassium uptake by plant roots in response to low K+ conditions, by a calcium-, CBL-, and CIPK-dependent pathway. Positively regulated by phosphorylation by CIPK23. Negatively regulated by a kinase-independent regulatory mechanism involving a competing direct binding of CBL10. Involved in the stomatal regulation by monitoring the turgor pressure in guard cells. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May interact with the cytoskeleton or with regulatory proteins (PubMed:12678562, PubMed:16814720, PubMed:16895985, PubMed:17898163, PubMed:9572739). Is essential with POT5/HAK5 for high-affinity potassium uptake in roots during seedling establishment and postgermination growth under low potassium conditions (PubMed:20413648).6 Publications
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 372 – 493 | cNMPPROSITE-ProRule annotationAdd BLAST | 122 |
GO - Molecular functioni
- identical protein binding Source: IntAct
- inward rectifier potassium channel activity Source: TAIR
GO - Biological processi
- potassium ion transport Source: TAIR
- regulation of ion transmembrane transport Source: UniProtKB-KW
- regulation of stomatal closure Source: TAIR
- response to salt stress Source: TAIR
- response to water deprivation Source: TAIR
- root hair elongation Source: TAIR
Keywordsi
Molecular function | Ion channel, Potassium channel, Voltage-gated channel |
Biological process | Ion transport, Potassium transport, Transport |
Ligand | Potassium |
Enzyme and pathway databases
BioCyci | ARA:AT2G26550-MONOMER MetaCyc:MONOMER-14552 |
Protein family/group databases
TCDBi | 1.A.1.4.1, the voltage-gated ion channel (vic) superfamily |
Names & Taxonomyi
Protein namesi | Recommended name: Potassium channel AKT1 |
Gene namesi | Name:AKT1 Ordered Locus Names:At2g26650 ORF Names:F18A8.2 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT2G26650 |
TAIRi | locus:2043839, AT2G26650 |
Subcellular locationi
Plasma membrane
- Cell membrane 1 Publication; Multi-pass membrane protein 1 Publication
Plasma Membrane
- plasma membrane Source: UniProtKB-SubCell
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 1 – 61 | CytoplasmicSequence analysisAdd BLAST | 61 | |
Transmembranei | 62 – 82 | Helical; Name=Segment S1Sequence analysisAdd BLAST | 21 | |
Topological domaini | 83 – 90 | ExtracellularSequence analysis | 8 | |
Transmembranei | 91 – 111 | Helical; Name=Segment S2Sequence analysisAdd BLAST | 21 | |
Topological domaini | 112 – 134 | CytoplasmicSequence analysisAdd BLAST | 23 | |
Transmembranei | 135 – 155 | Helical; Name=Segment S3Sequence analysisAdd BLAST | 21 | |
Topological domaini | 156 – 158 | ExtracellularSequence analysis | 3 | |
Transmembranei | 159 – 179 | Helical; Voltage-sensor; Name=Segment S4Sequence analysisAdd BLAST | 21 | |
Topological domaini | 180 – 193 | CytoplasmicSequence analysisAdd BLAST | 14 | |
Transmembranei | 194 – 214 | Helical; Name=Segment S5Sequence analysisAdd BLAST | 21 | |
Topological domaini | 215 – 241 | ExtracellularSequence analysisAdd BLAST | 27 | |
Intramembranei | 242 – 261 | Pore-forming; Name=Segment H5Sequence analysisAdd BLAST | 20 | |
Topological domaini | 262 – 265 | ExtracellularSequence analysis | 4 | |
Transmembranei | 266 – 286 | Helical; Name=Segment S6Sequence analysisAdd BLAST | 21 | |
Topological domaini | 287 – 857 | CytoplasmicSequence analysisAdd BLAST | 571 |
Keywords - Cellular componenti
Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000054121 | 1 – 857 | Potassium channel AKT1Add BLAST | 857 |
Post-translational modificationi
Phosphorylated by CIPK proteins CIPK6, CIPK16 and CIPK23. The activation by phosphorylation is induced by low K+ conditions and stimulates K+ uptake and relocation. Dephosphorylation by AIP1 repressed the transport activity.3 Publications
Keywords - PTMi
PhosphoproteinProteomic databases
PaxDbi | Q38998 |
PRIDEi | Q38998 |
ProteomicsDBi | 244667 |
PTM databases
iPTMneti | Q38998 |
Expressioni
Tissue specificityi
Preferentially expressed in the peripheral cell layers of root mature including root cortex and root hairs. Detected also, at a lower level, in the mesophyll of the leaves and at restricted sites corresponding to hydathodes and guard cells.2 Publications
Inductioni
In roots, strongly reduced after 2,4-dichlorophenoxyacetic acid (2,4-D) treatment and weakly reduced after benzyladenine (BA) treatment. In shoots, strongly reduced after abscisic acid (ABA) treatment and induced after benzyladenine (BA) treatment.1 Publication
Gene expression databases
ExpressionAtlasi | Q38998, baseline and differential |
Genevisiblei | Q38998, AT |
Interactioni
Subunit structurei
The potassium channel is probably composed of a homo- or heterotetrameric complex of pore-forming subunits. Possible heteromultimer with AKT2 or KAT3.
Part of a K+-channel calcium-sensing kinase/phosphatase complex composed by a calcium sensor CBL (CBL1, CBL2, CBL3 or CBL9), a kinase CIPK (CIPK6, CIPK16 or CIPK23), a phosphatase PP2C (AIP1) and a K+-channel (AKT1).
Interacts directly with AIP1, CBL10, CIPK6, CIPK16 and CIPK23.
6 PublicationsBinary interactionsi
Hide detailsQ38998
With | #Exp. | IntAct |
---|---|---|
itself | 7 | EBI-974289,EBI-974289 |
AKT2 [Q38898] | 3 | EBI-974289,EBI-1552774 |
CIPK23 [Q93VD3] | 6 | EBI-974289,EBI-974277 |
GO - Molecular functioni
- identical protein binding Source: IntAct
Protein-protein interaction databases
BioGRIDi | 2558, 16 interactors |
DIPi | DIP-36762N |
IntActi | Q38998, 9 interactors |
STRINGi | 3702.AT2G26650.1 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q38998 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 515 – 546 | ANK 1Sequence analysisAdd BLAST | 32 | |
Repeati | 550 – 579 | ANK 2Sequence analysisAdd BLAST | 30 | |
Repeati | 583 – 612 | ANK 3Sequence analysisAdd BLAST | 30 | |
Repeati | 614 – 643 | ANK 4Sequence analysisAdd BLAST | 30 | |
Repeati | 647 – 676 | ANK 5Sequence analysisAdd BLAST | 30 | |
Repeati | 680 – 709 | ANK 6Sequence analysisAdd BLAST | 30 | |
Domaini | 790 – 857 | KHAPROSITE-ProRule annotationAdd BLAST | 68 |
Domaini
The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids. The pore-forming region H5 is enclosed by the transmembrane segments S5 and S6 in the Shaker-type (1P/6TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.
The KHA domain (rich in hydrophobic and acidic residues) present in the C-terminal part is likely to be important for tetramerization.
Sequence similaritiesi
Keywords - Domaini
ANK repeat, Repeat, Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG0498, Eukaryota |
HOGENOMi | CLU_005746_8_3_1 |
InParanoidi | Q38998 |
OrthoDBi | 118742at2759 |
PhylomeDBi | Q38998 |
Family and domain databases
CDDi | cd00038, CAP_ED, 1 hit |
Gene3Di | 1.25.40.20, 1 hit 2.60.120.10, 1 hit |
InterProi | View protein in InterPro IPR002110, Ankyrin_rpt IPR020683, Ankyrin_rpt-contain_dom IPR036770, Ankyrin_rpt-contain_sf IPR018490, cNMP-bd-like IPR000595, cNMP-bd_dom IPR005821, Ion_trans_dom IPR003938, K_chnl_volt-dep_EAG/ELK/ERG IPR021789, KHA_dom IPR014710, RmlC-like_jellyroll |
Pfami | View protein in Pfam PF12796, Ank_2, 2 hits PF00027, cNMP_binding, 1 hit PF00520, Ion_trans, 1 hit PF11834, KHA, 1 hit |
PRINTSi | PR01415, ANKYRIN PR01463, EAGCHANLFMLY |
SMARTi | View protein in SMART SM00248, ANK, 5 hits SM00100, cNMP, 1 hit |
SUPFAMi | SSF48403, SSF48403, 1 hit SSF51206, SSF51206, 1 hit |
PROSITEi | View protein in PROSITE PS50297, ANK_REP_REGION, 1 hit PS50088, ANK_REPEAT, 3 hits PS50042, CNMP_BINDING_3, 1 hit PS51490, KHA, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Q38998-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV
60 70 80 90 100
SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
110 120 130 140 150
AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM
160 170 180 190 200
RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
210 220 230 240 250
AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT
260 270 280 290 300
LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
310 320 330 340 350
NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL
360 370 380 390 400
PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
410 420 430 440 450
LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ
460 470 480 490 500
LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
510 520 530 540 550
TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN
560 570 580 590 600
GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
610 620 630 640 650
KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS
660 670 680 690 700
ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
710 720 730 740 750
REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET
760 770 780 790 800
RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
810 820 830 840 850
IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH
LIFATDS
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A1P8B0E9 | A0A1P8B0E9_ARATH | K+ transporter 1 | KT1 AKT1, ATAKT1, K+ transporter 1, POTASSIUM TRANSPORTER, At2g26650 | 752 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X62907 mRNA Translation: CAA44693.1 U06745 Genomic DNA Translation: AAA96810.1 AC003105 Genomic DNA Translation: AAB95299.1 CP002685 Genomic DNA Translation: AEC07870.1 AK317729 mRNA Translation: BAH20386.1 AK227601 mRNA Translation: BAE99592.1 BT006442 mRNA Translation: AAP21250.1 |
PIRi | S23606 S62694 |
RefSeqi | NP_001324538.1, NM_001336078.1 NP_180233.1, NM_128222.6 |
Genome annotation databases
EnsemblPlantsi | AT2G26650.1; AT2G26650.1; AT2G26650 |
GeneIDi | 817206 |
Gramenei | AT2G26650.1; AT2G26650.1; AT2G26650 |
KEGGi | ath:AT2G26650 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X62907 mRNA Translation: CAA44693.1 U06745 Genomic DNA Translation: AAA96810.1 AC003105 Genomic DNA Translation: AAB95299.1 CP002685 Genomic DNA Translation: AEC07870.1 AK317729 mRNA Translation: BAH20386.1 AK227601 mRNA Translation: BAE99592.1 BT006442 mRNA Translation: AAP21250.1 |
PIRi | S23606 S62694 |
RefSeqi | NP_001324538.1, NM_001336078.1 NP_180233.1, NM_128222.6 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
5AAR | X-ray | 1.87 | A | 518-702 | [»] | |
SMRi | Q38998 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 2558, 16 interactors |
DIPi | DIP-36762N |
IntActi | Q38998, 9 interactors |
STRINGi | 3702.AT2G26650.1 |
Protein family/group databases
TCDBi | 1.A.1.4.1, the voltage-gated ion channel (vic) superfamily |
PTM databases
iPTMneti | Q38998 |
Proteomic databases
PaxDbi | Q38998 |
PRIDEi | Q38998 |
ProteomicsDBi | 244667 |
Genome annotation databases
EnsemblPlantsi | AT2G26650.1; AT2G26650.1; AT2G26650 |
GeneIDi | 817206 |
Gramenei | AT2G26650.1; AT2G26650.1; AT2G26650 |
KEGGi | ath:AT2G26650 |
Organism-specific databases
Araporti | AT2G26650 |
TAIRi | locus:2043839, AT2G26650 |
Phylogenomic databases
eggNOGi | KOG0498, Eukaryota |
HOGENOMi | CLU_005746_8_3_1 |
InParanoidi | Q38998 |
OrthoDBi | 118742at2759 |
PhylomeDBi | Q38998 |
Enzyme and pathway databases
BioCyci | ARA:AT2G26550-MONOMER MetaCyc:MONOMER-14552 |
Miscellaneous databases
PROi | PR:Q38998 |
Gene expression databases
ExpressionAtlasi | Q38998, baseline and differential |
Genevisiblei | Q38998, AT |
Family and domain databases
CDDi | cd00038, CAP_ED, 1 hit |
Gene3Di | 1.25.40.20, 1 hit 2.60.120.10, 1 hit |
InterProi | View protein in InterPro IPR002110, Ankyrin_rpt IPR020683, Ankyrin_rpt-contain_dom IPR036770, Ankyrin_rpt-contain_sf IPR018490, cNMP-bd-like IPR000595, cNMP-bd_dom IPR005821, Ion_trans_dom IPR003938, K_chnl_volt-dep_EAG/ELK/ERG IPR021789, KHA_dom IPR014710, RmlC-like_jellyroll |
Pfami | View protein in Pfam PF12796, Ank_2, 2 hits PF00027, cNMP_binding, 1 hit PF00520, Ion_trans, 1 hit PF11834, KHA, 1 hit |
PRINTSi | PR01415, ANKYRIN PR01463, EAGCHANLFMLY |
SMARTi | View protein in SMART SM00248, ANK, 5 hits SM00100, cNMP, 1 hit |
SUPFAMi | SSF48403, SSF48403, 1 hit SSF51206, SSF51206, 1 hit |
PROSITEi | View protein in PROSITE PS50297, ANK_REP_REGION, 1 hit PS50088, ANK_REPEAT, 3 hits PS50042, CNMP_BINDING_3, 1 hit PS51490, KHA, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | AKT1_ARATH | |
Accessioni | Q38998Primary (citable) accession number: Q38998 Secondary accession number(s): B9DI19 Q84MA7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 1, 2004 |
Last sequence update: | January 1, 1998 | |
Last modified: | December 2, 2020 | |
This is version 164 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families